Ruditapes philippinarum (Manila clam): 132730273
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Entry
132730273 CDS
T09557
Name
(RefSeq) glycine receptor subunit alpha-2-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132730273
04082 Neuroactive ligand signaling
132730273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132730273
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Glycine
132730273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132730273
NCBI-ProteinID:
XP_060572138
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAKILLCVSTFVFLQFLPQIKGQNLTEDMNMSTLLTKIFDGYDKKLSPNYNKAGTDRVVE
VTINIYIISMFSISEIDMDFSLSMFLRERWKDERLVYDDVLNLTRLELDPSLFDSIWVPD
LFIITEKFSEFHEVTVPNKMVHIYPDGTVQYSARVTGSFFCVMNLRRYPFDTQICKMEFE
SYGQTTKNLRFKWSNEPLTMGKGIKFPQFDLVTTETYNCDKEYFGSMSELAFPCVGLKFV
LERNYAYHIIQIYVPSILIVILSWVNFWLDCTSVPGRVSLALLTVLTMTTQSSGARSNLP
RVSYIKAIDVWMAACLTFVFLGLLEFAYVNVQSRVLNRRKSVIQFMRHQNGGKSPSIPSS
DATNGSIYNECSDSEGSKCSPCFKTLKGLERGRAIDKVSRVVFPCTFLIFNIFYWIYYFS
GTSEADNE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatattgctgtgtgtttctacattcgttttccttcaatttcttccacaaata
aaaggacagaatttaacagaggacatgaatatgtctacattattaaccaaaatatttgat
ggctatgacaagaaattatctccaaattacaacaaagcgggtactgaccgtgttgttgag
gtcaccataaatatatacattatatcaatgttttccattagcgagatagacatggatttc
tcgttaagtatgtttctacgtgagagatggaaagacgaacggctggtctatgatgatgtt
ttaaacctcaccagactcgaacttgacccgtctcttttcgattctatttgggttccagac
ctcttcataataacagaaaagttttcagaatttcatgaagttactgtgccaaataaaatg
gtccatatttatccagatggaactgtacagtacagtgccagggtaaccggttctttcttt
tgtgtcatgaacctcagaaggtacccattcgatacacaaatttgcaaaatggagttcgaa
agttatggccagacaactaaaaatcttcgtttcaaatggagtaacgagcccctaacaatg
ggaaaaggtataaaatttccacagtttgacctggtaaccacggagacatataactgtgac
aaggagtactttggaagtatgtctgaacttgcattcccttgtgttggactgaagtttgtg
ttagagaggaactacgcataccacatcatccagatctacgtacccagcattcttattgtc
atcctttcctgggtgaatttttggctagattgtacctctgtgccaggtcgtgtgtcgtta
gctttattgacagtactaactatgactacacagagttccggagctcgttcaaatcttcca
cgtgtttcatatatcaaggcaatagatgtttggatggctgcatgtcttacttttgtcttc
cttggattgttagagttcgcatatgtgaacgtacaaagtcgtgttttaaaccgccggaag
tcggtcatacagttcatgaggcatcaaaatggcgggaaatcaccatcgattcccagtagc
gatgccacaaatggatctatttataacgagtgttccgactccgagggaagcaagtgtagt
ccttgttttaagacattgaaggggctcgaacggggtcgtgcaatagataaggtgtcacga
gtagtgtttccgtgcacatttttgatatttaatatattttattggatttactatttcagt
gggacttctgaggcagataatgaatag
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