Ruditapes philippinarum (Manila clam): 132730349
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Entry
132730349 CDS
T09557
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132730349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132730349
Spliceosome [BR:
rphi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132730349
Complex C
U4/U6.U5 tri-SnRNP related factors
132730349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
132730349
NCBI-ProteinID:
XP_060572239
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MANRTVKDAHSIKGTNPQYLIEKIIRTRIYECRYWKEDCFALSAELLVDKAMGLKYVGGV
YGGNVKPAPFLCLLLKMLQIQPEKDIIVEFIRNEDFKYVRALGSLYMRLTGTSIDCYKYL
EPLYLDYRKLKRQQRDGTFELVHMDEYIDELLREERSCDIILPRIQKRNVLEEGNLLDSR
VSALDEDLEDMETSDEEDIMDIYKEAEKKRSSYRGNDKPARSPSPKSGRGSSPHHRDRTR
KRSRSKDRSDKDRKSDKRYKDEDRKHRSHKSSKDHRDKDRGDDRHKDRHRDRHRDHGSRD
SRHTSSKEDLEIQEANELRAKLGMAPLRP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatagaactgtaaaagacgctcattcaataaaagggacaaatccacagtatcta
atcgaaaagattatacgtacgaggatatatgaatgtagatactggaaggaggactgcttt
gcactttcagcggagctccttgttgacaaagcaatgggtctgaaatatgttggtggtgta
tatgggggtaatgtaaaaccagcgccatttctctgtttgcttcttaagatgttgcagatc
cagccagagaaagatatcattgtagagtttatcagaaatgaagacttcaaatatgtaaga
gcactgggatctctatacatgagactgacaggtacttccatagactgctataaatatctg
gaacctttgtatcttgactacagaaaattgaaaagacagcaaagagatggcacttttgaa
ctggtacatatggatgaatacattgatgagttgttgagggaggaacgttcctgtgacatt
attttacctagaatacagaaacgtaatgtgttagaggagggtaatctactggactcaaga
gttagtgcccttgatgaggacctcgaggacatggagacctcggatgaagaagatataatg
gatatttataaagaggcagagaagaaacgctccagctaccgagggaatgacaagcctgca
cgaagtccgtcaccaaagtctggtagaggcagttcaccacaccatagagatagaacaaga
aaaagatccagatcaaaagacagatcagataaagatagaaaaagtgataaaagatataaa
gatgaggacagaaagcatcgcagtcataaaagtagtaaagatcatcgtgataaagatcgt
ggtgatgacaggcacaaggacagacatcgtgaccgtcacagggatcatgggtcacgtgat
tcacgtcacacatcatcaaaggaagatttagaaatacaagaggccaatgaacttagagcc
aagcttggaatggccccactaagaccataa
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