Ruditapes philippinarum (Manila clam): 132730474
Help
Entry
132730474 CDS
T09557
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04137
Mitophagy - animal
rphi04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132730474
04137 Mitophagy - animal
132730474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132730474
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Others
Others
132730474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Intu_longin_2
C1ORF64
Motif
Other DBs
NCBI-GeneID:
132730474
NCBI-ProteinID:
XP_060572399
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSKGQVVLKNFFIFNPTYGPREGEEHKKIMFYFPKNTDIDTQIKTIGLCEAIVTFTHTFS
DRPCESLHTQKTRQLFFQPEKDFWMVMTVSVPFSEKTKEGQSYIEYHEEDVQDPVMDSIL
KQAYRMFTLFNGSIYYLLEKVNGQTHSLQQRLDHFFSRYLLTLRLGNSDLLDVFSGISFL
PLDKNTYLKVQCFINILESTFPGVKYTAFLYNDQLVWSGLEQDDMRIMYKYLTTSLFPAY
LEAELQSSGQQHTSPSLSRNMSMPTLGNVHFGKFITGPPNVHDEKNMGKIPRLYINTEFE
NEECFLLVYRALSASVCLLLNSSTEVNSDLCKKLDSFLGQQLSNLASEIGEQYSSRKQQP
VSEPIFKYIYFNHMNLAQKTTVHVESRKSNGVYVHQDTLKLLCDISSDLQRNNQDGETFV
KTMTDCWVVGKKSDQREMVVVINQKNLNLIEVNDEVKKLCSLNFNSIFFQD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggacaagttgttttgaagaacttcttcatttttaacccaacctatggccca
agagaaggggaggaacataagaaaataatgttttattttcccaagaatacagatatagat
acacagataaaaactataggtctttgtgaagctattgtcacatttacacatacattctca
gatcgaccatgcgagagtttacatacacagaaaactaggcagcttttttttcaaccagag
aaagacttttggatggttatgacagttagtgtgccattcagtgagaagacaaaagaaggg
cagtcatatatagagtaccatgaagaggatgtccaagatccggtcatggattctatactt
aaacaagcatatagaatgtttactttgtttaatgggtccatctattacctattagagaaa
gtcaatggccagacacattctttacaacaaagattagaccatttcttttctaggtattta
ctaactctacgactgggaaacagtgatctattagatgtatttagtggaatatcattccta
ccattggataagaacacatacctgaaagtacagtgctttatcaacattcttgagtcaaca
ttcccaggagtcaaatatacagctttcttatataatgaccagcttgtatggtcaggatta
gagcaggatgatatgagaatcatgtacaagtacctgactacaagcttgttcccggcttat
ctagaggctgaactacagtcaagtgggcaacaacatacgtcaccctcactcagtagaaac
atgtccatgccaacacttggaaatgtacattttggcaaatttataactggcccaccgaat
gtacatgatgaaaagaatatgggaaaaattccacgtttgtatataaacacagaatttgaa
aatgaggagtgtttcctgttagtttacagagcattgagtgctagtgtttgtttactactc
aattctagcacagaagtgaacagtgacctatgtaagaagctggacagttttctaggccaa
cagttatctaacctcgcctctgagattggggaacagtattcatctaggaagcaacagcca
gtttcggaacctatattcaagtacatctatttcaaccatatgaatcttgctcagaagacc
acagttcatgttgagagtaggaagagtaatggggtatatgtacaccaggatacgctcaaa
ctactttgtgacatcagctcagatctacagaggaataatcaagatggtgaaacatttgtt
aaaacaatgacagattgttgggttgttggcaagaagtccgaccagagagagatggttgtt
gttattaaccagaaaaatcttaaccttattgaagttaatgatgaagtgaaaaagctgtgc
agtttaaactttaacagtatctttttccaggactga
DBGET
integrated database retrieval system
