Ruditapes philippinarum (Manila clam): 132730475
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Entry
132730475 CDS
T09557
Name
(RefSeq) DENN domain-containing protein 3-like
KO
K20162
DENN domain-containing protein 3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132730475
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132730475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
GRAM
MVP_shoulder
bPH_3
Motif
Other DBs
NCBI-GeneID:
132730475
NCBI-ProteinID:
XP_060572403
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MMKIRDRKMSEFNMNFKKSFQNAEASPSRTTRSISLSPKMSLARSMSIMTVTRPRFGGSS
NNALPELPISDEVINSISTFCFPDGLKVHEKKPESTTHFFVLTDISGRRSYTTCLTLYRP
FSVEKMVIKYGGPNLHHFPMPLYSLTTMDNSLLHVCMLSYIERDPEEMTTFLKEYANVIT
HIPVPPAGHLAVNFRLYNLNVTLMPPTHPDKPVIDLELHLVFLCFNAEEFLKILSCILVE
ERIVFLSSNYALLTLIMESVMNLVLPFKWRFTYSTILPSSALGYLESPGTFMYGVHSRHK
EEVEQVEGLILVDIDEGTVFIPEDDSPGTSKKPKLLNFKGSSSVPSLPTGKLQNINLIET
IRPFNYNIEDLRQNKKKRVIAQNKFIADTCLELMVNLFRDVIYKLRFEQFHFDKEKFLEE
HATDRKFYQKVFLTDMFKVFLEERMNGTTDYWSDLEMKTRGFSQSRSMTPSSYRCKPIVP
LDKKDTTVFCLKEITDLKIHIKNTKMQITNAMEHADDYDDRTSLQYLRALYNFADNDNMA
AMQDFINVSTANVRILPAKVLSDLYSRLTEEEKTKFMNITGHEVILNCIKNKGGEGERQR
IRMDPIEVPDTDLNYHKFDEIISLKQMSNDYRTIKNLFEALTQETNSSTTGSHSKCSEIK
QMTFQIFVCCWEDNQIQCKKVKLEENTLSEEETILKISTLIKTDYGLGRMGLTDKRLFFL
SDVSNNYREIVKLREIKDLEQSEHSSLFSIFSRVQTLKIHRLGKGTSPFTAYLKEERNWW
YMVIREMWAGKIVAEAMKDVMMVQHAIQNTLLIDAIIARLHKSIQNCLYIVH
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaataagagatagaaagatgagtgagttcaacatgaatttcaagaaatcattt
caaaatgctgaagcaagcccaagcaggactacaagaagtatttcattaagccccaagatg
tcgctagcccgaagtatgtcaattatgaccgttacacgcccgaggtttggtggtagctca
aacaacgccttaccggaactaccaatcagtgatgaagtcattaactctatatcaacattc
tgttttccagatggtctgaaggtacacgagaagaaaccagagagtacaactcatttcttt
gtactgaccgatatctctggacgtcgatcatatacaacttgtcttacactttacagaccc
ttttccgtggaaaagatggttataaaatatggcggaccaaacctccaccactttcccatg
cctttgtactcactaaccaccatggacaacagtttgcttcatgtttgtatgttgtcttac
attgaaagagacccagaggagatgacaacattcctcaaggaatatgccaatgttattaca
catatccctgtgcctccagctggccatttagctgtgaatttcagattatacaatttaaat
gtgactttgatgcctccaactcatccagacaagcctgtgattgaccttgaactgcatttg
gtgtttctgtgtttcaatgctgaagagtttctaaaaatactctcctgtattctcgtggag
gagagaatagtattcctgtcctcaaattatgcacttctcactcttattatggagtctgtg
atgaatctagtattaccgttcaaatggagattcacgtactccacgattctcccatcatca
gcactaggatacctggaatctccaggtacgttcatgtatggtgtacattccaggcataaa
gaagaagtagagcaggttgaaggtctgattttagtagatattgatgaaggaacagtattt
ataccagaagatgactctccaggtaccagcaaaaagcctaaattgctcaatttcaagggt
agttcctctgtaccaagcttacctacagggaaattgcaaaacattaatctcattgaaact
atacgaccattcaattataacattgaggatctcagacaaaacaaaaagaaaagagttatt
gctcagaataaattcattgcagatacatgcctggagctaatggtcaatttattcagggat
gtcatatacaagttaaggttcgaacagtttcattttgataaagaaaagtttcttgaggaa
catgcaacagatagaaaattttatcaaaaggtatttctgacagacatgttcaaggtattt
ctagaagagcgtatgaacggcacaactgactattggtcagatctagaaatgaaaactcga
ggatttagtcaatcccgatctatgaccccatctagctatcgctgtaaaccaatagtgcca
ttagacaagaaagatacaacggttttctgtctcaaggaaataacagatttaaagatccat
ataaaaaacacaaaaatgcagataaccaatgcaatggaacatgcggatgactacgatgac
agaacgtcgctccagtacctccgagcattgtataattttgccgataacgataacatggct
gccatgcaagattttatcaatgtatcaactgccaatgtcagaattttaccagccaaagtt
ttatccgacctgtacagcagactgacagaagaggagaaaacaaaattcatgaatataaca
ggtcatgaggtcattctgaattgtataaaaaataaaggaggggagggagagcgtcagaga
atcagaatggaccccatagaagtccctgacacagatctaaattatcataaatttgatgag
attatctcattaaaacagatgtcaaatgactacaggacaataaagaacttgtttgaagct
ttaacacaagaaacaaactcatccacaacaggtagtcattcaaaatgctcagagattaag
cagatgaccttccagatatttgtgtgttgttgggaggacaatcagatccagtgcaaaaag
gtcaagttagaggagaacacactctccgaggaggagacaatcctcaaaatctcaacactc
atcaaaacagactatggtcttggtagaatggggctcactgataaaagattatttttcctg
agtgacgtatcaaacaactatcgagagattgtgaagttgagagaaatcaaagatttggaa
caatccgagcatagcagtttattcagcatatttagtagggtgcaaacactcaagatacac
agattaggaaagggaacaagtccgtttacagcttatttaaaggaggagcggaattggtgg
tatatggtaattagagagatgtgggcggggaaaattgtggcagaggcaatgaaggacgta
atgatggtacaacatgctatacaaaacacacttctcattgacgccataattgcaaggttg
cataaatcaattcagaattgtctatatattgtacattga
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