Ruditapes philippinarum (Manila clam): 132730611
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Entry
132730611 CDS
T09557
Name
(RefSeq) leucine-rich repeat protein 1-like
KO
K10348
LRR-repeat protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132730611
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
132730611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_6
YHS
HisKin-conflict
LRR_5
Motif
Other DBs
NCBI-GeneID:
132730611
NCBI-ProteinID:
XP_060572560
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MRLTCDVDCVNRALATHNMKKTGKSTRSQISIGKKPGNGPLKENALYIMLCTAKDRNGTR
YPIKDNISQVFTKFVNEGKATIRFKQPEQDLCISKADVIQLKSFLNVLRQALQGKNLDNI
TLSSLAPASSKNIEKPKTRLVITTKRDYPLTTNFPMSLESLQVSECRMKRIDSRIFNLRN
LTRLDLSHNCIELVPDELSKLRNLSELVLAHNNLTIFSPSVCLKESLQKSLNLLDLSDNK
IQKLPLQICELMHLVNLKFDNNEMEMLPPTIGRLNRLQFISACNNKLRVLPANFMKLRLD
SVDLFGNSFDAIENYQISAGSVDVPTLMECAARSIKKERVSYSEEDLHLHLCRYLDSARQ
CWCGNYCFQCSVRYTSKVDLRRVATTVTAVDVQGGTGVPVEGFLCSPQCLKKFQNNPNAY
WK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagactaacgtgtgatgtagattgtgtgaacagggccttggcaacacacaatatgaag
aagacagggaaatcaacacgatcacagatatcgatagggaagaaaccaggaaatggcccg
ctcaaagaaaatgctctgtacattatgctttgtacagcaaaagacagaaatggtaccagg
tatcctataaaagacaatatatcacaagtatttacaaagtttgtcaatgaaggcaaagct
accataagatttaagcagcctgaacaagatctgtgtataagcaaagctgatgttattcag
ttgaaaagttttctgaacgtattacggcaggcgttacaggggaaaaaccttgacaacatc
acgctatccagtcttgcaccagcatcctctaagaacattgagaaacctaagacacgactt
gttataacaacaaagagagattacccactgacgactaattttcctatgtcattagagtca
ttgcaggtatctgagtgccgtatgaagagaattgactcaagaattttcaacttgcggaac
cttacgagacttgacctgagtcacaactgcatagaacttgttcccgacgaattatcaaaa
ttacggaacttgtcagaacttgtgttagcccataataacttaacaattttctcaccgagt
gtatgccttaaggagtctttacaaaaatcattgaatttgttagacctaagtgacaacaaa
atacagaagctgccgttacagatatgtgaacttatgcacctcgtgaacttgaaatttgat
aataacgaaatggaaatgttgccacctacaatcggtcgattgaatagacttcagtttata
tctgcttgtaataataaattaagagttttgcctgccaacttcatgaaactgaggttagac
agtgtggatttgttcgggaacagttttgatgcgattgagaactaccaaatttcagcaggg
tctgtggatgtgcccacgttgatggaatgtgcagcaagatcaataaagaaagaaagagta
tcctattctgaagaggaccttcatttacatctatgccgatacctggactcagccaggcag
tgttggtgtggtaactactgtttccagtgcagtgttcgatacacaagcaaggtggatctg
cgccgtgtagccactacagttacagctgtggatgtacaaggagggactggggttcccgtg
gaaggatttctgtgctcgcctcaatgtctgaaaaagttccagaacaacccaaatgcctac
tggaaatag
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