Ruditapes philippinarum (Manila clam): 132730648
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Entry
132730648 CDS
T09557
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1-like
KO
K25818
nucleolar and coiled-body phosphoprotein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132730648
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Others
132730648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP40_C
Motif
Other DBs
NCBI-GeneID:
132730648
NCBI-ProteinID:
XP_060572609
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MADSDDKSTLLPVVVDYIKRKCKEFVPMLNKSPKFKNVQTDGSPKLEEVFAQWKSEGVKR
KLGTEGSPAAAKKAKKEESSSSSSSSESEDEKPKAPVSKAATVKQAGQKGTEAVKRLHES
SSSDSSSSDSDNAKPPPKKQATVSKPTAQKKADSSSDSSSESSEDEKPKKQAPAKTVVPK
QVPKKKEESSSSDSSDDEKPIAKKTVPANKKTATANKGSDSSGTSDSDADSESTDDEKSS
GKKKVLKKKVTPQAKTYNNVPPPAQKATPVKSAVKKDSSSGSSDDSSSDDSTKKKAVQPK
PAVSKLAEVKAVAKKDSSSSSSDRSSEDEAPKAKPTQAKPPPAKAAAKKESSSSDSSSSE
DEAPKKVQAKPASPKKPQAVVTKKDSSSSSSSDSSSEEETPKTKVAAKSPVPVKATVKKA
DSSSSDSSSSEDETPAAKKVASPAKVAVKSTPAKNAKADSSSSSSDSSSEDEAPKKSPAV
SKQVTPKAPPKAAAKDSSSSSSDSSSEDEATKKTAQSVTPKAVGGKPAAAKAKTKDSSSS
SSDSSSEDEAPNKAAAAKSVTPAKPATPKVAAKTATPKAAVKDSSSSSSESSSEDEAPKK
ATPAKPVTPKVAAKTATPKAAAKDSSSSSSDSSSEDEAPKKATPAKPVTPKVAAKTATPK
AAAKDSSSSSSDSSSEDEAPKKATPAKPVTPKFAAKTATPKAAAKDSSSSSSDSSSEDEA
PKKATPAKPVTPKVAAKTATPKAAAKDSSSSSSDSSSEDEAPKKATPAKPVTPKVAAKTA
TPKAAAKDSSSSSSDSSSEDEAPKKATPAKPVTPKVAAKTATPKAAAKDSSSSSSDSSSE
DEAPKKATPAKPVTPKVAAKTATPKAAAKDSSSSSSESSSEDEAPKKSTPAKPLTPKGAA
KPVTPKAVAKDSSSSSSDPSSEDEAPKKAASSSLNKQQSPVSQNKNVKTPTPKSQINKKD
NTSSSDSSSESDNENTKTVNTSKVNKSQSVPNKSQNKSDSSSDSDSSDSDNEKSKSVSKS
PGLTPVIGKTKAGKQNGPVTSTPYSKVNGNAEEGSDDSGVSSGSHEVNSNNKNNTSQNNS
KTQRRRSSPFRRVREEQVEVDDRLKDNSFTAKRGAHGSWGEKANKDLIVTRGKSFRHEKT
KKKRGSYRGGAIDTSNVHSIKFDD
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctgatgacaagagcacgttattgccagtagttgttgattacatcaaacga
aaatgcaaagagtttgttccaatgttgaacaagtcacccaagtttaaaaatgtacagaca
gatggcagtcctaaacttgaagaggtgtttgctcaatggaagagtgagggtgtgaaaaga
aagttgggtactgaaggcagtccagcagcagctaagaaagcaaagaaagaggaatctagt
agtagcagtagcagctctgaaagtgaagatgaaaagcctaaagcaccggtatcaaaagct
gctacagtgaaacaagcaggccagaagggaactgaggctgtcaaacgattgcacgaatca
agctctagtgattcgtcttcatctgatagtgataatgcaaaacctccacctaaaaaacaa
gcaacagtatccaagccaacagctcaaaagaaggcagattccagctccgatagcagtagt
gaatctagtgaagatgaaaagcctaagaaacaagccccagcgaaaacagtagttccaaag
caagtccccaaaaagaaagaagaaagttctagctctgattcttcagatgacgagaaaccc
atagcaaagaaaactgtgcctgctaacaagaaaactgctactgctaacaaaggctctgat
tcaagtggaacctctgactctgatgctgattctgaaagtacagacgatgagaagtcttca
ggaaagaagaaagtacttaaaaagaaagtaaccccacaggcaaaaacatacaataatgta
ccacctccagcacaaaaggctacaccagtcaaatctgccgttaagaaagattcgagcagt
ggtagtagtgatgatagctccagtgatgatagtacaaagaaaaaggctgtgcaacctaaa
ccagcagtttcaaagctagcagaagtaaaagcagttgcaaagaaagacagtagcagcagc
agtagcgacaggtcaagcgaagatgaagcccctaaagctaaaccgactcaggctaaacca
cctccagcaaaagcagcagcaaagaaagaaagtagtagtagtgattcaagctctagtgag
gatgaagcaccaaagaaagtgcaagcaaaacctgcaagtcctaaaaaaccacaggcagtt
gtaacaaagaaagatagcagcagcagtagtagtagtgactccagttctgaagaggaaacc
cctaaaacaaaagttgctgctaaatcaccagtgcctgttaaagcaacagtgaaaaaggct
gatagtagtagcagtgattccagttcaagtgaagatgaaactccagctgctaaaaaagtt
gcgtcacctgcaaaagtggcagttaagtcaacaccagctaaaaacgcaaaggcagactca
agttctagtagttctgattcttctagtgaagatgaggcaccaaagaaatcacctgctgtt
tcaaaacaagtaactcctaaagcacctccaaaagcagctgctaaagattccagctcaagt
agttctgattcaagctctgaggatgaagccactaaaaagacagcacaatctgtaactcca
aaggctgtaggtggtaagccagctgctgctaaagcaaaaaccaaagattcaagttcaagt
agttcagattctagctcagaggatgaagctcccaataaagctgctgcagcaaaatctgta
actccagcaaaaccagcaactcccaaagttgctgcaaaaacagcaacacctaaagctgca
gttaaagattcaagttcaagtagttcagaatctagttcagaagatgaagccccaaagaag
gctacaccagccaaaccagtaactcctaaagttgcagcaaaaacagcaacacccaaggct
gcagctaaagattcaagttctagtagctcagattctagttcagaagatgaagcccccaag
aaagctacacctgctaaaccagtaactcctaaagttgcagcaaaaacagcaacacccaag
gctgcagctaaagattcaagttctagtagctcagattctagttcagaagatgaagccccc
aagaaagctacacctgctaaaccagtaactcctaaatttgcagcaaaaacagcaacaccc
aaggctgcagctaaagattcaagttctagtagctcagattctagttcagaagatgaagcc
cccaagaaagctacaccagctaaaccagtaactcctaaagttgcagcaaaaacagcaaca
cccaaggctgcagctaaagattcaagttctagtagctcagattctagttcagaagatgaa
gcccccaagaaagctacaccagctaaaccagtaactcctaaagttgcagcaaaaacagca
acacccaaggctgcagctaaagattcaagttctagtagctcagattctagttcagaagat
gaagcccccaagaaagctacaccagctaaaccagtaactcctaaagttgcagcaaaaaca
gcaacacccaaggctgcagctaaagattcaagttctagtagctcagattctagttcagaa
gatgaagcccccaagaaagctacaccagctaaaccagtaactcctaaagttgcagcaaag
acagcaacacccaaggctgcagctaaagattcaagttctagtagttcagaatctagttca
gaagatgaagcccctaaaaaatctacacctgctaaaccattaactcctaaaggtgctgca
aaaccagtaacaccaaaagcagttgctaaagattcaagttccagtagttcagaccctagt
tcagaagatgaagcccccaagaaagctgcatcttcatcattaaataaacaacaatccccg
gtgtctcaaaataaaaatgtaaagactcctactccaaaatcacagataaataaaaaggac
aatacaagtagtagtgactctagctcagaatcagacaatgaaaatacaaagacagtgaat
acctctaaagtaaataaatcccaaagtgttccaaataaatcacaaaataaatcagactct
agttcagacagtgactcctcagactctgacaatgaaaaatccaaatctgtttcaaaatca
cctggtttaacaccagttattggtaaaactaaagcggggaaacaaaatggtccagtaact
tctacaccatattccaaggtaaacgggaatgctgaagagggttctgatgattcaggagtt
agctcaggctcacatgaagttaactctaataacaagaataataccagtcagaataacagt
aaaacacagagaagaaggagcagtccattcagacgtgtaagggaggagcaagttgaagta
gatgatagattgaaggataattcatttactgcgaagagaggagcacatggatcatggggt
gagaaagccaacaaagacctcattgtgacgaggggtaaatcgttccgacacgagaaaacg
aagaaaaaacgaggcagttacagaggtggagctatagacaccagcaatgtacattctatt
aaatttgatgattaa
DBGET
integrated database retrieval system
