Ruditapes philippinarum (Manila clam): 132730657
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Entry
132730657 CDS
T09557
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132730657
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
Patched domain-containing proteins
132730657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
Motif
Other DBs
NCBI-GeneID:
132730657
NCBI-ProteinID:
XP_060572615
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MRLNGLYECVERKIGGAFARYGRFVAAHAWKIIIVAIIVNGALGVGMMRLKSNIEAENVY
LPQGTQARHDVQRMKRMYPDLSGSNFNSLQLLQDGAWAKVIIKSNYGNLMNRTVLEEIRE
LNNAIQNITAIGKDGTRIKYSDICAKVNDRCDVDGELFWDPEFLAAVDTNKITYPRFTTP
TGTTNYKSDIGGTIVTDDNENYLLSAEFINLDYIIRTDNDKYTKLAEIWVDDFKAYMETF
QSDNFDIAYSHFNSMDEELDRNIKGDITLFSITMTLMITYACVATLSSRITDQVGQRMWL
GFGGVLTAGLAIVSSFGLCAAVGVHFVSIVGVIPFLIMGIGIDDMFILLSGLSGAQIHKT
VEDKMAATMRASGVGITITSLTDLIAFMAGAASNFIAVRNFCIYTGAAVIFCYLNNVTFF
AACMAINERRVQDNRHYGSCRRIKTKEELKEEGQSDRYIMCCGGRPPTNRDEAESFVDKL
PRWIIPKIVLKTPFKIGIIVLFMAYLAASIYGCINLKQGLIFTQLVAEDSYYFKFADWKE
QYFTRQTPVSFVVTKTYKYSDPDTHALIEDLIINAQSNSYFDNTFEVNWLKTYKATSYYE
DSSEKEFIAGFLRFIQDTKYALFENDVIVDRTQSKIVTSRVYVMSDDMVDSQAEGNMMLK
SREIANAAEIECFAFSPYFVPYEQYVAILGQTLKTVGIALAAVFVVTCIFMPHPVLIVFV
TVAVAMIMTGVFGFLIYLDVALSSITMIHLIMSIGFSIDFTAHICHGYMISDGKSRDLRV
KQAIDKTGAPIFHGAISSILGIIVLVGAKSYIFRTFAAVMSFVLLFGIAHALLLLPVILS
WLGPGRLNATEDSENTEIGTSESKGADLVKMTNGKYSFDKQA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaatggactgtacgaatgtgttgaacgaaagattggcggcgcgtttgcgcgt
tacggaagattcgttgctgcgcatgcgtggaaaatcatcatagttgccatcattgtcaat
ggagcgcttggtgtcggaatgatgagactgaaatcaaacattgaagctgaaaatgtatat
ttacctcaaggaacccaagcccgtcacgatgtacagagaatgaagagaatgtatcccgac
ctcagcggatcgaacttcaactccctgcagctgttgcaagatggggcatgggccaaggtt
ataataaaatctaactatggtaacctgatgaacagaacagtgctggaagaaatacgtgaa
ctgaataatgctatacagaacattacagcaattggcaaggatggaacgcgtatcaagtat
tccgacatatgcgctaaagtaaacgaccgttgtgatgttgatggagaactgttttgggac
ccggaatttctggccgccgtcgacacaaacaagattacatatcccaggtttacaacaccg
actggaaccactaactataaatccgatataggaggtacgatagtgacagacgacaatgag
aattacctgcttagtgctgaattcatcaatcttgactacatcatcagaactgacaatgat
aaatacactaaacttgctgaaatttgggtggatgattttaaggcgtatatggagaccttc
cagtcggataattttgatattgcctactcacattttaattcaatggacgaggaattggac
aggaacattaagggagatattacactgttttctatcacaatgaccttaatgataacatac
gcatgcgtggcgaccttatcatccagaattacagaccaagttggtcaaagaatgtggcta
ggttttgggggcgttttaactgctggactagctattgtgtccagttttggtctttgtgct
gctgttggtgtgcattttgttagcattgttggtgttataccttttctgatcatgggtatt
ggaatcgacgatatgtttattttattgtctggattatctggcgctcagatccacaaaacc
gttgaagacaaaatggcggccacgatgagagcttccggtgtagggatcacaataacctcc
cttactgaccttattgcatttatggcgggagcagcttcgaatttcatcgctgtgagaaac
ttctgtatttatacaggtgcagctgtcattttctgctatctgaataacgtgacattcttt
gcggcgtgtatggcaataaatgaacgccgggttcaagacaaccgccattatggatcatgt
aggagaatcaaaactaaagaggaattaaaagaggaaggacaatcggacagatacatcatg
tgttgtggtggaagaccgccaaccaaccgtgatgaggccgagagtttcgtcgacaaactt
cctcggtggattataccgaaaattgttctgaaaacgccatttaagatcggaattattgtg
ctatttatggcgtacctcgcggcttccatatacgggtgtatcaatttaaagcaaggactt
atttttacacagttagtggctgaagattcatattattttaagtttgccgactggaaagag
caatacttcactcgtcaaacaccggtttcttttgtagtaacgaaaacgtacaaatactct
gatcccgatacgcatgcgctgatagaggatctgattataaatgcacaatcaaatagttac
ttcgataacacattcgaggtaaactggctaaaaacgtataaagctacatcgtattatgaa
gacagcagtgaaaaggaattcattgcaggatttttacgttttatacaggatacgaaatat
gccttattcgaaaatgacgtaattgtagacaggacccaatcaaaaatcgttacgtcacgc
gtatacgtcatgtccgatgatatggttgacagccaagcagagggaaatatgatgttaaaa
tcaagagagattgcaaacgctgcagaaatagaatgttttgccttttctccgtactttgta
ccttatgagcagtatgtagctatattgggtcaaacactaaagactgtcggtatagctctt
gcagctgtttttgtggtcacgtgtatctttatgccacatccggtgctgattgtcttcgtg
actgtcgctgttgcaatgattatgaccggtgtatttggattcttgatttatcttgacgtg
gctttaagttcaattacaatgatccacttgataatgagtataggattttctattgacttt
acagcacatatatgtcacggttatatgatctcagacgggaaatcacgagatttaagagtc
aaacaagcgattgacaaaactggagctccaatttttcacggagcaatttcatcaatcctt
ggaatcattgtgttggttggtgcaaaatcttatatttttagaacattcgctgcggtcatg
tcatttgtcttactgtttggtattgcgcatgcgctattactacttcctgttattttatca
tggcttggacctggtcgattaaacgccactgaagacagtgagaatactgagattggcacc
agtgaaagtaaaggtgccgaccttgtgaaaatgacaaatggtaaatattcatttgataaa
caggcttga
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