Ruditapes philippinarum (Manila clam): 132730805
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Entry
132730805 CDS
T09557
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132730805
Membrane trafficking [BR:
rphi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132730805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
RGS-like
PDZ
PDZ_6
C1_1
PDZ_2
PH_13
SOS1_NGEF_PH
C1_2
PH
PDZ_Tricorn
DUF3394
CRAL_TRIO
Motif
Other DBs
NCBI-GeneID:
132730805
NCBI-ProteinID:
XP_060572807
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MPLKKWRSMDIFNFSPRENPIMESISNKFAEISQSHAGTLLRNRRLGSLGSVKSADDQSE
QTDSANSTVLLQRTAIIQKDEKGYGLTVSGDNPVYVASVKTGGAAEKAGVQVGDKIIKVN
GKLVTNSNHTEVVKMIRAGSYVALTLLGKPSNTHLSNRDSIYEREPSSNRESSGSFRDSI
VDKITGPQPVDAEKEKEVRQQKVNTIRVMYETVHEEYDKLRKACKANPSDSKLQDKLQEK
EKTLKILEAQLMSLPGTGNFNRDSQPPQINVDSESATDSPHSVTPWLPKKERKHMKHSSS
PGAMYSPAEAQERGSANVSRSKSDVSTRKNPLSEYSFGHLGYKRTESSPEVSQVSTGKKV
KKSASFKGFCRTYARKMKSSTASVPYTVSDLGSDSPCTSPSCSPTPIHSQNLDIDTVTGD
SGIEDGSQNSIVMSTRASTHIIGMDDDDFASDDESFDYERRSKPPVSPFLIKLQNFETGD
SKVFSDLRVLETKPAHMAIFMHYVLTHHNPAPLLFYQMTSLYMNAQGSCKDLKKWAYEIH
STFIVHSAPLRVPSLGDHIVQEVDTMLMFKSEREEQLRSIFGNARTVAKDDVQKLLEDLR
QKKEQGLIEGSGDLKDHMDRSEELKIVEKYLFSDLEKCVSSEEDDKMSAQGWAIATFLRH
SGLSKPTSHSSNILERVPSFVTKDKQMSKFKFSNKSKTKSHKGHQFVLSHLYKKENCLKC
NKVLWGVGFQGYQCQTCDLCVHRQCVDDLEEVCNKKKNKRASTALNVFKPKSSQGISVRS
ALSDIITSATPMINDAEREQVGSPTSNQPNVFTQPLKDPEDKEINAFKEQGHSVGSLVNR
FEKQSPEQETAGRYNRFGYSRRSAAEFSPRITRKNAISPRHSRRPSMNQSLSVPPRMIPE
YELDYDWKNSDIGRSESMKGRGDTITRPTKRSNSDLAMDENTLRALQSASSSTSSLRSME
SPSTSMDTLTAQIQDDSDFDVEPELPSLKQVLGEDTVRKLKPKEKKRQDVINELFYTEKC
HVRNLKILDKLFYRPMLKEQAIPQDFTKSLFPNLETMIFLHGSLNDSMKNRRKEKSVITN
VGDLLLQRFDGEAGENFRNGCAIFCRNQSHTLETLKIRVRKEPKMAQLLSDAENNPLCQR
LALKDIIPKQFMRLTKYPLLIENLLKYTQTNTEEYSNLERAQKCSKHILEYVNQAVKDCE
NHQRLIDLQRKMDKKSIDNSPEMEELRTFDLSKHKLLHDGSLIWSLNNRKQIELHVVLLE
RAMVLLQKQDERLVLKLQSTQLVAGKTDSKKHSPLLWLNNVLARNDATDKKAFFVVNTSK
AGPQIYKLVAGTADEQKTWTKYITQASEAMKKNEINQKKKPPVQEEIPREPPVQSGTENG
EVQDIESGTLVHPEDVTFNDPVINTAVQVITPLEKLRQNDEHLAAVLEERQGLLAELLNV
NPNDVADKVQDVVEGEEGEGVPQELIAACHHQASEIVNMMRENTPPRVMPNTDSGEHVES
VEDMTMPIPMERLRDMANRMNQILTNLLAQTRATATMTPMTQAAVNSRDEERDRLRRELK
FAQEELNRLRRIQKKQMEAQKEKGEDVEEETIEEEKPGRPASIVSETSTVSESEGDENKE
DSEQTDEQEPEVTEDGMPGLPIEPEIVSELETLNEVSPGTMDTLVDTDSALELAEISALE
SDDTNTYEEAEVEAVDEELHEMEPPDEDQMEDPDLDTPIVKISAPDNESDDDDDDDDDDD
DEEEENKDDDTKANEKTEEYDVDVEDDVNNGDIELTGQVENVMDRLKVEGNTEGESDTDV
NSEKKESGGEEFHDAIEGKEDRNSTEITEDPGGLQTDTKTDEVLKDSSKNSDEKSENENT
ETDDKIDSGNKEQSNNNIEITDSDVMLKQKDISNIDENLSEIKDNTVDSLNEAQSSEEV
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgaagaagtggcgttcaatggatatatttaacttttctccaagagagaaccct
attatggaaagtataagtaataaatttgccgagatatctcaatcacatgctggcacctta
ctcagaaatcgcaggctgggcagccttggtagtgtgaagagtgcagatgatcagtctgag
cagacggacagtgctaactctacggtactgcttcagaggactgccattattcagaaagat
gaaaaagggtatgggttgacagtgagtggggacaatcctgtctatgtggcaagtgtgaaa
actggtggtgcagcagagaaggctggggtacaagtcggagacaagattatcaaggtgaat
gggaagctggtgacgaactctaaccatactgaggttgtcaagatgattagggctggatcc
tatgtggcgttgacgctgcttggcaagccatctaacacccatttatccaacagagattct
atatatgagcgcgagcccagttcaaaccgagaatcatcaggatcatttagagactcaata
gttgataaaataactggaccacaaccagttgatgctgagaaagagaaagaagtaaggcaa
caaaaagtgaacactatacgtgttatgtacgagactgtacatgaggaatatgataaatta
cggaaagcatgtaaagcaaatccttcagatagtaaacttcaagataagttgcaagagaag
gagaagacattgaagattttagaggcacagttgatgagcctacctggaactggcaacttt
aaccgagattcacagccacctcagataaatgtagattcagaatcagccacagattctccg
cactcagtgaccccatggcttccaaagaaagagcgtaaacatatgaaacacagctcttcc
ccaggggccatgtatagccccgccgaggcccaggaaaggggtagtgcaaatgtttctagg
tcaaaatccgatgtttcaacacgcaaaaatcctctttctgagtattcctttgggcacctg
ggatataagagaacagaatcgagtccggaggtgtcgcaagtaagcacaggaaaaaaagta
aaaaaaagtgccagtttcaaagggttttgtagaacgtatgcccgtaagatgaaatctagc
actgcttctgtaccttacacagtttcagatctgggctctgattcaccgtgtaccagtcca
agttgttcacctacaccaatacatagtcaaaacctagatatagatacagttactggagac
tccggcattgaggacggaagtcagaactctatagtgatgtctaccagggcaagtacgcat
ataattggtatggatgatgatgattttgcatcagatgatgaaagttttgactacgagcga
agatctaaacctcctgtctcaccatttttgattaagcttcagaactttgagacaggggac
agtaaagtgttcagcgacctacgtgtgttggagaccaagccagctcacatggcgatattt
atgcactacgttttaacacatcataatcctgcgccacttttattctatcaaatgacgagt
ctgtacatgaatgctcagggcagctgtaaagatttaaagaaatgggcgtatgaaattcat
tcaacatttattgtacattcagctcctttaagagtgccatcattgggtgatcacatcgta
caagaggtagatactatgttaatgttcaagtcagaacgggaagaacaactacgttctata
tttggtaacgcacggactgttgctaaggacgatgtacagaaacttctagaagatctcaga
cagaagaaagaacaaggtttgatagagggctcaggggatctgaaagatcacatggataga
agtgaagagttaaaaattgtagaaaaatacttgttttctgatctggaaaaatgtgtatca
agtgaagaagatgacaaaatgtcggcccagggctgggcgatcgctacattcctccgtcac
agtggcctcagtaaacccacttctcacagtagtaatatcttagaacgtgtgccaagtttt
gtcactaaagataaacagatgtctaaatttaaattcagtaataaatcaaagaccaagagc
cataaaggtcatcagtttgtattaagtcatctctataaaaaggaaaactgtctgaaatgt
aataaagtgctatggggagttggtttccaaggttaccagtgtcaaacatgtgatctgtgt
gtacatagacagtgtgttgatgatctagaagaagtgtgtaataagaagaagaataaacgt
gcctcaactgcattaaatgtcttcaaaccaaagtcatcgcaaggtatatcggtgcgatct
gccttgtccgacataataacatcagcaacaccaatgataaatgatgcggagagggaacaa
gttggcagtcctacttccaatcaaccaaatgtttttactcaaccacttaaagatcctgaa
gacaaggaaatcaacgcattcaaggaacaaggccattcagtcgggagcttagtgaaccgg
ttcgagaaacagagtccggaacaggaaacagccggaaggtataatagatttggttactca
cggcgatccgctgcagaattttcaccgagaattaccaggaaaaatgctatatcaccaaga
cacagtcgtcgtcccagtatgaaccaatcattgtcagttccgccaaggatgataccagaa
tatgaattagactatgattggaaaaattccgatataggacggtcagaaagtatgaaaggg
agaggtgatacaattactcgacctacaaagcggtcaaacagcgaccttgccatggatgag
aacacgttacgagctcttcaatcagcaagttcctctacgtctagtcttagaagtatggag
agcccgagtacatcgatggatacattgactgcacaaatacaggatgattctgactttgat
gtggaaccagaactgccctcacttaaacaagtcttaggtgaagacacagttcgcaaactt
aaacccaaggaaaagaaaagacaagatgttattaatgaattattttacacagagaagtgc
catgtacgtaacttgaaaattttggacaagctgttttatagaccaatgttgaaagaacag
gccatacctcaggatttcacaaaaagcctttttcctaatttggaaactatgattttcctt
catggttccctaaatgattctatgaaaaaccgacgtaaagaaaaatctgtgataaccaat
gtgggtgatcttttattgcaaaggtttgatggtgaggcgggggagaacttccgtaacggc
tgtgccatattctgtagaaaccagtctcatacgttagaaactcttaaaataagagttcga
aaagaacctaaaatggctcaacttctctcggatgcagagaataatccactatgtcaaagg
ctggccctgaaagatatcattcctaaacaatttatgaggctgaccaagtacccactgttg
atagaaaacctacttaaatatacacaaactaatactgaagaatatagtaacctagagcgg
gctcagaagtgcagtaaacatatcttagaatatgtgaaccaggctgtgaaagactgcgag
aatcatcagcgattaatagatctccagaggaaaatggacaaaaagtccatagataacagt
ccagaaatggaggaacttaggacgtttgatttaagtaaacacaagttacttcatgatggg
tcattaatttggagtttaaacaatagaaaacaaatagagctacatgtagtgctactagaa
cgtgcaatggttctcttacaaaaacaagacgagagactcgtattgaagctgcaaagtacg
cagcttgtggcgggtaaaactgactctaagaaacatagtccattgttatggttgaataat
gtgctagctagaaatgatgcgacagataagaaagcatttttcgttgtgaatacttccaag
gcagggccgcagatttacaaactagttgctggaacagcagacgaacaaaaaacttggacc
aagtatatcacgcaggcgtcagaggccatgaagaagaatgagatcaaccagaagaagaaa
cctccggtacaagaggaaatacccagggaaccacctgtacaatctggtacggagaatgga
gaagttcaggatatagagtcggggacattggtacacccggaagatgtcacatttaatgat
ccagttatcaatacagccgttcaagtgattacaccgctcgagaagttacgacagaatgac
gaacatttagctgctgtgttagaggagagacaaggtctgttagcagaacttctcaatgtc
aaccctaatgatgtcgccgataaagttcaggatgtagttgagggagaagagggtgaaggt
gtacctcaggaattgatcgcagcatgtcatcatcaggcttccgaaatcgtgaatatgatg
agagaaaatacaccaccccgtgtcatgccaaatacagactctggcgagcatgtagagtcg
gtagaggacatgactatgcctatacctatggagagattacgtgacatggccaacagaatg
aaccagattcttacaaatctacttgctcaaaccagggctactgccaccatgactcccatg
acacaggctgcagtaaatagccgggatgaagaacgagaccgtctccgtagagagctgaaa
tttgcgcaagaggagttaaatcgtttgcgacgtatacagaaaaagcagatggaagctcag
aaagagaaaggggaagatgtggaagaagaaactattgaggaggaaaagccaggacgtcca
gctagcattgtatccgagacttcgacagtttctgaatctgagggtgacgagaacaaagag
gatagtgaacaaactgatgaacaagaaccagaagtgacagaggatggtatgcctggcctt
ccaatagaaccagaaattgtgagtgagcttgaaacattaaatgaggtatccccgggaact
atggacaccctagtggacactgattcagctctagaactagcagaaatatcagctcttgaa
agtgatgatacaaatacatatgaagaagctgaagtggaagctgttgatgaagaattacat
gagatggaacctccagatgaagatcaaatggaagaccctgatttggacacaccaattgtt
aaaataagtgcaccagataatgaaagtgacgatgatgatgatgacgacgatgatgatgat
gatgaagaggaagaaaataaggatgacgatacaaaagcaaatgaaaagactgaagagtat
gatgttgatgttgaagacgatgttaataatggtgatattgaattgacaggtcaggttgaa
aatgtaatggatagattaaaagttgaaggaaacactgaaggtgaaagtgacactgatgtt
aatagtgaaaaaaaagaaagtggaggtgaagagtttcatgatgccattgagggtaaggag
gacagaaatagcacagaaatcactgaagatcctggtggtctacagactgatactaaaact
gatgaagttttaaaggatagttcaaaaaacagtgatgagaaaagtgaaaatgaaaatact
gaaactgatgataaaatcgatagtggaaataaagaacagtctaataataatatagaaata
actgattcagatgtgatgctaaaacagaaagacatcagtaatattgatgaaaatttaagt
gaaataaaagacaatacagttgatagtttaaatgaggcacagtcgagtgaggaagtttga
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integrated database retrieval system
