Ruditapes philippinarum (Manila clam): 132730890
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Entry
132730890 CDS
T09557
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132730890
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
132730890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_25
AAA_29
nSTAND_NTPase5
TPR_MLP1_2
PEARLI-4
Motif
Other DBs
NCBI-GeneID:
132730890
NCBI-ProteinID:
XP_060572956
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MRKSVVSKDAKYCEGSIVKIKLENVLTYDSVEFKCGPHLNVVIGPNGTGKSTIVCAICLG
LAGKTSWLGRAQSPTDFIKYGKSKARIELELYNSDGDNWTIAREINKEGQQTRWWVNGRA
ATQKAVEELVSRLNIQVGNLTQFLPQEKVADFAKMSESELLENTEKAVGDPEMYERHQKL
KESRTNAKSLEQEFQNLQERINQEVQKNARIEQDVKNFEERENFLAKIATLEIKKAWVKY
ECERLQYMSTKEEKEQKEKKLKEIRAAHAPLMKKLDDAKKNKESIDNMMKTKGLELKEAA
KKAEANGKEGDNLTDKYVEAQDELKFKKDQEDARKKRVRDLNKQLEALENELQNTEETED
VQPLLEKVNRGMRETQQKLGHINMEGENLRGKIEGRRRNINGMSKDLQALRNIENQRLQT
LRAKHKDTYDAVMWLRENRDKFKGNIHEPIMLCVNMKDPHMAKYLENHISFNDMRAFVCD
TSEDMNTFMDLMREDQKLRVNAVKTPPRVSLDTCHPKHPIQQYRKYGFHSYLMDLFTCPE
AVMKFLCTQYKVQSIPVGDNRTKELVDKIVKEQPDLNCFYTADNQYMIKKSRYDGSTSSR
SVKLKNPTLLTVSMDDNREKELVNQIQIETESVRKEEDLYNNMKVQSRQLDKHLNELRED
RKSLMTRKDIKKKLQSQISAKKQTIQNVEGEAIDLDAEEKKVAKKFQDINAKKFKNLQQY
LENTQKCVKASTEKVRMSLRHAETIREYNRLEADIREQSQTLQSAESEFERIKEKLRNCK
EVAKRLLLAAKRASGTGPDEEVSPSLKSTFAGLPDTIEEIDNCIHEHQVRADCTVQTDER
VVREFKRRKEEIERLETQLANKEQERDSHQATIEEAKSQWLDPLQELIGRINKSFSHFFS
CLKCVGEVDLHIPDNPEEYSKYGVRIRVKFRDSEQLRELSPFHQSGGERSVTTVLYMMSL
QELAKCPFRCVDEINQGMDPHNERKVFELVVNTVCNKSASQYFLLTPKLLPDLEYAKNMT
VLCVYNGPDMLNHKDWNLKKFLQLRARLED
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtctgttgtatccaaagatgctaaatattgtgaaggttcaattgtgaaaata
aagttggaaaatgttttaacctatgactctgttgagtttaaatgtggccctcatctgaat
gttgtcatcggaccaaatggaactggcaaatccacaattgtttgtgcaatttgtcttggc
ttggcaggaaaaactagctggttaggtcgtgcccagagtccaactgattttatcaaatat
ggaaaatcaaaagcaaggattgaacttgaactatacaactcagatggagataattggaca
attgctcgagaaattaacaaggaaggtcagcagactagatggtgggtgaatgggagagct
gccactcaaaaagctgttgaggaactagtaagtcgtttaaatattcaagtaggaaatctt
acacagttcttaccacaagagaaagtggctgactttgctaagatgagtgaatctgagtta
ctggaaaacacagaaaaagctgttggtgatccagaaatgtatgagcgccatcagaaactg
aaggagtcccgtaccaatgccaaaagtttagagcaagaatttcagaatctccaagagcgt
atcaatcaagaggtgcagaaaaatgcaagaattgaacaagatgtgaaaaattttgaggag
cgtgaaaatttccttgccaaaatagcaacactggagatcaaaaaagcctgggtgaagtat
gagtgtgaaagactgcaatatatgagtaccaaggaggaaaaagagcaaaaagaaaaaaaa
ttaaaggaaatacgagcagctcatgctcccttgatgaaaaagttggatgatgccaagaag
aataaagagtctatagataatatgatgaaaaccaagggcctggaattaaaagaagctgca
aagaaagctgaagctaatgggaaggaaggagacaacttaactgataagtatgtagaagca
caagatgaacttaaatttaaaaaggaccaagaagatgcaaggaagaaaagagtgagggat
ttgaacaaacagttggaagcattagaaaatgaactacaaaatacagaagaaactgaagat
gttcagcctttactcgaaaaagtaaatagaggtatgagagaaacacaacagaaattaggt
catatcaatatggaaggtgaaaatctcagagggaagatagagggtcgcagaagaaatata
aatggaatgtcaaaagatttgcaggcattgcgtaacattgagaatcagcgtcttcaaact
ctacgtgcaaaacataaggacacttatgatgctgtgatgtggctgagggaaaacagagat
aagttcaaggggaatattcatgaaccaattatgctctgtgtaaacatgaaagatccgcat
atggccaagtacctggagaatcatatatcattcaatgatatgcgagcatttgtatgtgat
accagtgaggatatgaataccttcatggacttaatgagggaagatcaaaaactcagggtt
aatgctgtgaaaacacctcctagagtttccttagatacctgccatcctaaacatccaata
caacaatacagaaagtatggtttccatagttacctgatggatttgtttacatgtcctgaa
gctgtaatgaagtttctatgtacacaatataaagttcaaagcattccagttggagacaac
agaactaaagaactggtagataaaattgtgaaggaacaaccagatcttaattgtttctat
acagcagacaatcagtatatgataaagaagagtagatatgatggatcaacatcctctaga
agtgttaaacttaaaaatcccacacttttgactgtatcaatggatgataatagggagaaa
gagcttgttaaccaaatacagattgagacagaaagtgttagaaaagaagaagatttgtac
aataatatgaaggttcagtcacgccaacttgacaaacatttgaatgagctcagagaagat
aggaaaagtttgatgacaagaaaagacattaaaaagaaactccagtcacagataagtgct
aagaagcaaacgattcaaaatgttgaaggggaggcaatagacttagatgcagaggaaaaa
aaagtggcgaaaaaatttcaggacattaatgcaaaaaagtttaagaatcttcagcaatat
cttgaaaatacacagaaatgtgtgaaagcgagtacagagaaagtaaggatgagtttacgt
catgctgaaactattagagaatataacagactagaggcagatatcagagaacagtctcaa
actctacaatcagctgagtcagaatttgagagaatcaaggagaagttacgtaattgtaaa
gaagtagccaaaagacttttattggcagcaaagagagccagcggtactggacctgatgaa
gaagtatctcctagtttaaaatcaacatttgcgggtctacctgacacaatagaggagata
gataactgtatacatgagcaccaagttagagcagactgtacagtacagacagatgaacga
gttgttagggagtttaagagacgtaaagaagagatagagagactagaaacacagctagca
aataaagaacaggagagagatagtcatcaggcaactatagaggaagccaaatcacaatgg
ttagacccactacaagagttgattggaagaataaacaaaagttttagtcacttctttagt
tgtctaaaatgtgtaggagaagttgatcttcacattccagataatcctgaagagtacagc
aagtatggtgtacgtatcagagtaaagttccgtgactctgaacaacttagggagttgtct
cccttccatcagagtggtggtgagcgaagtgtgacaacagtcttgtatatgatgtcctta
caggaacttgccaaatgtcctttcagatgtgtcgatgaaattaatcagggcatggatcca
cacaacgaaaggaaggtgtttgaattagtagtaaatacagtttgtaataagtctgcctca
cagtatttcctactcactccaaagttgctgccagacctggagtatgctaagaacatgact
gtgttatgtgtatacaatggacctgatatgttaaatcataaagactggaacctaaagaaa
ttcttacaacttagggccagacttgaagactga
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