Ruditapes philippinarum (Manila clam): 132730891
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Entry
132730891 CDS
T09557
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04977
Vitamin digestion and absorption
rphi04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
132730891
04980 Cobalamin transport and metabolism
132730891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132730891
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
132730891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LMBR1
Bap31
Motif
Other DBs
NCBI-GeneID:
132730891
NCBI-ProteinID:
XP_060572958
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MTASIHSVLAAGWIPFVIVIVLVLLFSSIYIKYYTSKHDSEWSTTICAILALSVTLMTTA
LIPVDVFLVSFMKNSDGTFSEWAVSNETRHSVEQSVLIGYYTMYGLITFCMFLLLPFMYF
FYEEREDDATCKSRCCGALKYSIVFLIVIFVLLLIGALVHTKKVPTKNQNATEWQKVEAL
FDMESNWIENSLSLVISILSLIGMLALFTYTAYGMAILPIDLIRGNRNVRRERLEVQSRR
SDNRDRIQAIKNKYSGGRSMSSRDAARVSDLEESGALMERQERHLEARDTCCQKCWLVLR
PFAVVFGILLILVAILVFLSLLLTNIDKTMNSLGPKLGYALPKSTLPNPVDIVLVFCQKA
FPLDYILFAALVLYLVISSMAGIRNIGIWFFCLRMYKIRPRRTRPQGILMMCMILMFIQL
GINIILYELTPQYSSYGSQHFQESNSTKTEKCSTNQGEEECIITRMSLLLTRFFYKMWFF
GAAYYWCTWAFLLFILIGFLVAICKKSKSSIDGEVESDDIDDSDEELIQG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttctatacattcagtgttagcagcaggatggattccttttgttattgtcatt
gtgcttgttctgttgttttcaagtatttacatcaaatattacacaagtaagcatgacagt
gaatggtcaacaacaatatgtgctatacttgcattaagtgttaccttgatgacaactgca
ttgatcccagttgatgtttttcttgtgtcgtttatgaagaattcggatggcacatttagt
gaatgggctgtcagtaatgagacgagacattcagtggagcagtcagttctgattggctat
tacacaatgtatggtcttataacattctgcatgtttctcctgctgccattcatgtacttc
ttctatgaggaaagggaggatgatgccacatgtaaatctagatgttgtggtgctttgaag
tactcaattgtatttcttatagtgatatttgttcttctcctcattggagctcttgttcat
acaaagaaggtaccaacaaagaaccagaatgctacagaatggcagaaggttgaagctttg
tttgatatggagagtaactggatagagaacagtttgtcattggttatcagtatactcagt
ctcattggaatgttggctctcttcacatatactgcttatgggatggccattttaccgata
gatctgatacgaggaaatagaaatgtgaggcgagagaggttggaagtacagagtagaaga
tctgacaatagagataggattcaagccattaaaaacaagtactctggaggtcgaagcatg
tcaagtcgggatgctgccagggtgtcagatcttgaagagtcgggggcattaatggagaga
caagagcgccacctagaagcaagagacacctgttgtcagaaatgttggcttgttttacga
ccatttgctgttgtgtttggtatcttgttgatattggtggccatcttggtcttcctttct
ctacttcttaccaatattgacaagacaatgaacagtctaggccctaaattagggtatgcc
ttgcctaaatcaacattacctaaccctgttgatatagtgcttgtcttctgtcagaaggca
ttcccattggactacatattgtttgcagctcttgttttgtacctggtgataagttctatg
gctggtattcggaacattggaatatggttcttctgtctgaggatgtacaagatacgaccc
cggcgtacccgacctcagggtattttaatgatgtgtatgatactgatgtttatacagctt
ggaattaacatcattctgtatgaacttacaccccaatactcctcttatggcagtcaacat
tttcaggaatctaacagtacaaagacagagaaatgcagtacaaaccaaggagaggaagag
tgtataatcaccaggatgtcactattactaacaagatttttctacaagatgtggttcttt
ggagcagcttattactggtgtacctgggcctttctcttgtttatcttgattggtttcctg
gttgctatctgtaagaagtcaaagtcatctatagatggtgaggtggagagtgatgacatt
gatgatagtgatgaagagctgattcaaggttaa
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