Ruditapes philippinarum (Manila clam): 132730901
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Entry
132730901 CDS
T09557
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132730901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132730901
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132730901
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
HECT type E3
132730901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF3413
Motif
Other DBs
NCBI-GeneID:
132730901
NCBI-ProteinID:
XP_060572967
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MYSFEGDFRRKPQQSLRGASKKANKSTLLKNAQQQREKREEQRLKLENAIKIQSFYRGYR
VRKKQREGLRQEFDVQQNSLQKVAPTVEALYTLVLKISHFYSDKEDGPRLVWLSQQLVKY
KDPYLKLLSGDSKGPQQVKMLLLLCLRYLWSIAESGQPIAIPMRMLEVFTSQAVYNNKDI
LKLVWKCLIDSGYFECMRLLLNNKVPSSLERSHVPPTPVAASIYELVMNPISYAATCKDT
QFSKLVLTSVCRSLLCPAYTEQISQFLLPAMAYGKYPFPFVDLIQTLISQCREEEVGEGK
NKGYGRTSYKKKLKTDMTPWLLRAFLMLGEKFVETMSAESFSMYIQVLQRLLPTLPASRN
LDDDDSDSEEDMDYAANGADEDRLEEVREECLGVIDSQAHVHKMVALVSGEPDTHVMFAV
SVICHCLMSQHRFSIHKRRLLYSLAYNPKFVRSLWHCCVSVSTITATRTETALIMMLSRG
LTMSDRDIGRIVPLLATFCSMFSHSLHTLHDADFYEDTTGSMPFNLLEIIQMVIALRDVC
LGIIELAHPDAKPTVNEDYRQALSRVGVKTRNNNVKELNQQTLQWGYLFKVTASLVRQIY
TRDARRSFCPKDLWLSDRVKIQADGPSQICQSNMSMFTQRPFRTMQSLSKYQEDEGLPPL
SNRDVKNLVILTELPFVVSFHERVKILQKLIGKDKEENQGGQHQFLSGPSINVMIRRNYI
YEDAFEKLSPDNEANLKLKMRVQLVNAAGLDEAGIDGGGIFREFLNVLLKTGFDPNRGFF
SQTTDRLLYPNPQAAVLTNDYMDHYYFLGRMLGKAIYENMLVELPFASFFLSKILSRHSG
YLDIHHLASLDPEMYKNLLFLKQYDGDIKDLGLDFTTVNNDFGETKVVELKRDGHNIPVT
AQNRIEYIHLMADYKLNQQIKRHCTAFREGLSDLINLEWLRMFDQQELQVLISGAAVPID
IEDLKQYTNYSGGYDADHPVIKMFWQVVEELTDEQKRQLLKFITSCSRPPLLGFKDLYPA
LCVHYGGNEPDRLPTASTCMNLLKLPECKDYATLKHKLLYAIESGAGFELS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtacagttttgagggagatttcaggaggaaaccacagcagtccttgagaggggctagc
aaaaaggcaaataaaagcacactcctgaagaatgcccaacagcagcgagaaaagagagaa
gagcaacgtctgaaacttgagaatgccattaaaatccagagtttctatcgaggttatagg
gtcaggaaaaaacagagagaagggttacgtcaggagtttgatgttcagcagaattctctc
cagaaagtggcaccaacagtggaggctctttacacattggtgttgaaaattagtcatttc
tattctgacaaggaagatggcccaagattggtatggttaagtcaacaactagtaaaatat
aaagacccctatctaaagttgttatctggagactccaagggtccacaacaggtgaagatg
ctacttctactgtgcttaagatatttatggagtatagcagaaagtggacagcctatagct
ataccaatgagaatgctggaggtattcacttcacaggctgtatataataacaaggatatt
cttaagcttgtatggaaatgtcttattgattctggttattttgagtgcatgcggttgtta
ttaaacaacaaggtaccatccagcctggagagaagtcatgttccaccaaccccagtagct
gccagtatatatgaactagttatgaaccctataagttatgctgcaacctgtaaagatact
caatttagtaagcttgttttaacatcagtgtgtcgatcgttactgtgtcctgcatacaca
gaacagatttcacagtttcttctacctgccatggcatatgggaaatatccattccccttt
gtagacctcatacagaccctgataagtcagtgtagagaggaggaggtaggagaagggaag
aataaagggtatggtagaacaagttacaagaaaaaattgaagacagacatgacaccgtgg
ttactaagggcattccttatgttaggggaaaagtttgttgaaacaatgtcagcagaatca
ttcagtatgtatatccaggtattacagaggttgctaccaacgttaccagcttcacggaac
ttagatgatgatgattctgactcagaagaagatatggattatgctgccaatggtgcagat
gaagacagactggaggaggtgagagaagaatgtttaggtgtgatagattcacaggcacat
gttcacaagatggttgctttagttagtggggaaccagacacccatgttatgtttgctgta
tcagtcatatgtcattgtctgatgagtcaacatcgattctctatacataaacgaaggtta
ttatacagtttggcttacaatccgaagtttgtgcgtagtttatggcattgttgtgtctct
gtatcaactataacagcaaccagaacagagacggcattaatcatgatgttgagtcgagga
ttgactatgtctgatagagatataggcaggatagttcctttacttgccacattctgttct
atgtttagtcactcactacatacacttcatgatgctgacttttacgaggatactacagga
agcatgccattcaatctattagagattatacaaatggtgatagctttgagagatgtttgt
ctgggtataatagagttggcacatcctgacgcaaaacctacagtcaacgaggactacagg
caggcactgagcagggtcggtgttaaaaccaggaataataatgttaaagagttgaatcag
cagacattacagtggggatacttatttaaggtgacagcaagtttagtgaggcagatttat
acacgtgatgcacggagatcattttgtcctaaagatctgtggttatcagatagagtcaag
atacaagccgacggaccgtcacagatttgtcagtctaatatgtctatgtttacacaacga
ccattcagaacgatgcagtcactctctaaataccaagaagatgagggactgccacctttg
tctaacagggacgtcaaaaaccttgttatccttacagaactaccatttgtagtttcattt
catgagagggtcaagatattacagaagttgataggtaaagacaaggaagagaatcaaggt
ggacagcatcagttcttgtctggaccaagtattaatgtaatgataagaagaaactacatc
tatgaggatgcttttgagaaattgtctcctgataatgaagcaaacctgaagttaaagatg
cgggtacagttagtcaatgcagcaggtttagatgaggctggtatagatggaggtggaatt
tttcgagagtttcttaatgttttacttaagacaggatttgaccctaacaggggattcttt
agtcaaaccactgaccgtctactatatccaaacccacaagcagctgttcttaccaatgat
tacatggatcactattatttcctaggaaggatgctcggaaaagctatatatgagaacatg
ttggtagaattaccatttgcttcattcttcctgtcaaagattttgagtcgtcatagcggt
taccttgacattcatcaccttgcttcactagacccagaaatgtacaaaaatcttctcttc
cttaaacaatatgatggagatatcaaagatctagggttggattttacaactgtgaataat
gactttggtgaaacaaaggttgtagaattaaagagagatggacataatattccagtgact
gcccagaacagaatagaatacattcatctgatggcagattataaactaaaccagcagatc
aagaggcattgtacagcattccgtgagggtttgtcagatttaataaacctagaatggttg
agaatgtttgaccagcaagagttacaggtccttatatctggagcagctgtccctatagac
attgaggatctgaaacagtatacaaattattcaggaggttatgatgctgatcatccagtg
attaagatgttctggcaagttgtagaggagttaacagatgaacaaaagagacaacttctc
aagtttataacaagttgttctagaccaccacttttaggctttaaggatttgtacccagct
ctgtgtgttcactatggtggtaatgagccagaccggttaccaacagcaagtacatgtatg
aaccttctgaaactacctgaatgtaaagattatgccacactgaaacacaaactcttgtat
gccatagaatcaggtgctggctttgaactgagttga
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