Ruditapes philippinarum (Manila clam): 132730997
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Entry
132730997 CDS
T09557
Name
(RefSeq) ubiquitin thioesterase zranb1-like
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132730997
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132730997
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132730997
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C64
132730997
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
132730997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OTU
AnkUBD
Zn_ribbon_RanBP
G-gamma
Motif
Other DBs
NCBI-GeneID:
132730997
NCBI-ProteinID:
XP_060573109
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MSDDLKWDCPRCTYKNFPASRKCCLCQGPRPATIISDLENSEQDIYKVAELEARNNDSHI
DKTNDSTWVCAHCTYKNPLSYKEKCAQCLMPKNFKMPVSPKIDSIGTDRTKRLDLKPSTV
TSGESSVAGTSKMLMLKDKFSFTKTIAAVIKWSCRACTYENFPKTPACIMCHTSRDLSPD
DNSDDTSSKQLHLNELQLEIDVDSKNQENIKSGQNSPNRTNVSQRNNKSGQNSPQNMNEE
SNLNVSRVSPVSSNNSNRSGQNSANNSGQNSPNNKSSPSSSHRNLSQENIIPYNKDSELG
SPKNNRSGLVSPNDSGQITPSSVVRGSPGIARASKSNRNQNRVRNETLYIQDTVGAIGGM
KDDDRRERRIQKLRKKLGREDTIWLNACESVVNGDSRGIEIYLTSGGDPARQLTKDEVLI
LGRPSAFEPGHTLVHLALRFRRDDMVAVLLATTDMSSKGFKRLPSYTCPDLSSAIRRDIS
MMLRQHKGFSCYFLADLCTFTLPASIWDLPQHVQTQLYDEILDTDVDKELTEECVINWSV
ELTENLRSRLYALWNRTAGDCLLDSVLQATWGILDIDNTLRRALSDSLLEARNSFYPKWK
EYETVQAHLMNFSLDEDQWQRDWALLLSLASQPGASLEQMHIFALAHILRRPIIVYGVKV
VKSFRGESIDFARFEGVYLPLLWERSFCSKTPIALGYTRGHFSALVPMEIDSGIALAGAH
IDNAVEEQVFYLPLVDHEGAFLPIHFVTGFELGQEETILRKWFDCIVTQEGLFVAIQKVE
KRPELVSQMVEVWLDHYRHEANKRSHPANTSQYSSEEESDQEE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgatttgaaatgggattgcccacgctgcacttacaagaattttcctgcatca
agaaaatgctgtctatgccagggtccgagacctgctaccattatatcagacctggaaaat
tcagagcaagatatttacaaggtggcggaactggaagctagaaacaatgactcacatata
gacaagacaaacgactctacatgggtctgtgctcattgtacttacaaaaatcctctctca
tacaaagagaaatgtgcccagtgtttaatgccaaaaaatttcaaaatgccagtttcgcca
aaaatcgattcaatcgggacagatagaacaaaacgtttagatttaaaaccttcaacagtg
acatcaggggagtcgtctgtggcgggtacatctaaaatgttgatgttgaaagataagttc
tctttcactaaaaccatagcggctgtgataaagtggtcatgtagagcttgcacttacgag
aacttcccaaagactccagcttgtatcatgtgtcatactagccgagacttgtcgccagat
gataattctgatgacacctcttcaaaacagttacatttaaatgagcttcagttggaaatt
gacgttgactccaaaaaccaggaaaacattaaatctggacaaaactccccaaacagaaca
aatgtcagtcagagaaataataaatctggtcaaaattctccccaaaacatgaacgaagaa
tcaaatttaaatgttagtagagtaagtcctgtttcatcaaataatagtaatagatcaggt
cagaactcagcaaataattcagggcaaaattctccaaacaataaatcttcaccttcatca
tctcacaggaatttaagtcaagaaaatatcataccatataacaaagattcagagctaggc
tctccaaaaaataacaggtctgggctagtttctccaaatgattcaggtcagattacacca
agtagcgtcgtacgtggctctccaggcatagctcgagcttcaaagagtaataggaatcaa
aaccgagtcaggaatgagacattgtatattcaagatacagttggtgcaataggtggaatg
aaagatgacgacaggcgtgaacgtagaatacaaaaactcaggaaaaaactgggtcgcgaa
gatacaatatggttgaatgcctgtgaatcagttgtaaatggtgactctagaggaattgag
atttatttgacatcaggtggcgatccagctcgacaactcaccaaagacgaagtgttgata
ttaggtcgtcccagtgcatttgagcccggtcacacacttgtacacttagctttgagattc
aggcgagatgacatggtcgcggtgttgctcgccaccactgatatgtcatctaaaggattt
aaacgtttgccatcatatacatgtccagatctgtcgtctgctataaggcgggatatttca
atgatgcttagacagcataaaggattctcctgctattttctcgctgatttgtgtacgttt
actctaccagcaagtatatgggatttaccacagcatgttcagacacaactttatgatgaa
atactagacacagatgttgataaagaattaaccgaggaatgtgtgataaattggagtgtt
gaactgacggagaatttacggagtagattgtatgctctgtggaaccggaccgccggagac
tgtctgctagactcggtgctgcaggccacgtggggtatattagacatagataatacactg
aggcgggcattgtctgatagtctcctcgaggctagaaatagtttttatccgaaatggaag
gagtatgaaacagtgcaggctcatttgatgaattttagcctggatgaggatcagtggcag
agagattgggccttgttactgagtcttgctagtcagccaggagccagtttggaacagatg
catatatttgctcttgcccatattttaagacgacctatcatcgtgtatggtgtaaaagtt
gtgaaaagtttccgtggtgagagtattgactttgccagatttgaaggtgtatacttgcca
ttgctatgggaacgaagtttttgttctaagacaccaattgccctcggttatacgagggga
catttctcagccctagttcccatggagatagattctggtatcgccctggcaggagctcac
atagacaatgctgtagaggaacaggtgttttatttgccattagttgatcacgagggagcc
ttcctacctatacattttgtcacaggctttgagcttggacaggaggagacaatactgagg
aaatggtttgactgtatagttacccaggaaggactctttgttgccatacagaaggtggag
aaacgaccagaactggtcagtcagatggtggaggtgtggctagatcattatagacacgag
gcaaataaacgatctcacccggcaaacacgtcacaatattcgagcgaggaggaaagtgat
caggaagaataa
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integrated database retrieval system
