Ruditapes philippinarum (Manila clam): 132731137
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Entry
132731137 CDS
T09557
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132731137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132731137
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
GTPase
132731137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Motif
Other DBs
NCBI-GeneID:
132731137
NCBI-ProteinID:
XP_060573245
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
GAKLFYLSGMVNGEYQKTEVHNLCRFISVMKFRPLTWRTTHPYILADRMEDISDPETVRK
FSKTDRNISLYGYLHGTHMKNNVNVHIPGCGDFSIHDLQFLSDPCPTPEKQKKRSLSQKD
RLIYAPMSGVGGIVYDKDAVYIDLGGSHSHTDAQRDEDAPQPMNELVSSMMSLNNPLDKK
MTTSEVSLFSGGIKSSEMIIDDDKDDDDDDYSGGRQFETVETDGRVRRRAVFDTNVDKMK
SNDDDDEFEDDDDSDDEKYDDDWWKAVLKLLRLMAESGEELCLIPNVDKMKSNDDDDEFE
DDDDSDDEKYDDDDDGGDDNVDEDNDDISDDDDEDEDDDEDSEEESDASKVMKKQIRKSN
ISGEPSLAFDDSDSDEGEEDDQTVKKLKKSDNSDDEDDDDDGDDDDDDSCNKCEKNQSVN
RNNKNGSSLLVNSELKSVKKRKLSNITNSRRIASMEAVQNIDDNLTSKTGNDNLTSKNKQ
EANTIDSDSSDEGDSSDSDIISFKPTKEKSSPLKATEVKPSKTEEVDKQKDTSDNVKSGK
SLSQKLLTLSETDYFMLNAKKKSEDSLEEKEPEKTVDNDVSDGDEVSEDEEDGSEMDDED
EEEEGSFRWKHDLASQAAANFRQRQAGRINYRKLIYGKDEEEAVGDDGGDDEDEIGGLFK
VLKQKSEAQAVDRIAVNSTDCSKCLKNTLIQLEVDKIQELIADCFVTGKWDENKDAEALL
QKDDELYGDFEDLETGEMHKGKKEDNDDDDNDDSPDDDDDDDDIGSDGEKKKQPEELKKK
KADMTAEERRVEKKRKLKEMFDTQYDMKGDTEFYDNWKEELDQQAKMNRAVFEDMDDELR
VQYEGFRPGMYVRVEIHGVPSEFVTNFDPTYPVILGGLLSVENNVGYVQARLKKHRWHKK
ILKTKNPLIISLGWRRFQSIPLYSIQDHNMRNRLLKYTPEHLHCNASFWGPITPQGTGLL
AVESVANVTADFRIAATGVVLELDKSQQVVKKLKLTGTPQKIYNKTAFIQGMFNSALEVA
KFEGASVRTVSGVRGQIKKAAKTPEGAFRATFEDKILLSDIVFIRTWYPVDVPQFYNPVT
SLLLPKNEKQGWTGLKTLGQLHREKNMKPTFSDDSVYKKIERKGKGYTPLSVPKALQKIL
PFKDTPKSLLAKKDPVQRVAILREPHEAKIAKMMSMLKSVHEHKKRTERVKMRERVTKHH
KQVQKMDLVKQKKNREAKKEVFRVLGKMENRKNRNKRD
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
ggagcaaagttgttttacttgtccggtatggtaaatggagaataccagaagactgaggtt
cacaatctttgtaggtttatatctgtgatgaaattccgacctttgacctggagaacaact
catccatatattctggctgacagaatggaagatatatctgatcctgaaacagtacgtaag
tttagtaaaacagatcgcaacatatctctgtacgggtacttgcacggcacacacatgaag
aacaacgtcaacgttcacattcccggctgtggagatttctctatacatgatttacaattc
ttgtctgatccatgtccgacaccagagaaacagaagaaacgatctctaagtcagaaggat
agactgatttatgcaccaatgtctggtgttggtggtatcgtgtatgataaggatgctgtt
tatattgaccttggtggaagtcattcgcatacagatgctcagagggatgaagatgctcct
caaccaatgaatgagcttgtttcatcaatgatgtctcttaacaacccattggataagaaa
atgacaacatcagaggtttcactgttttctggtggaatcaaaagctcagaaatgatcatt
gatgatgataaagatgatgatgatgatgattatagtggtggaaggcagtttgaaactgtt
gagactgatggcagagtcaggagaagagctgtgtttgatacaaatgtagacaagatgaaa
tctaatgatgatgatgatgaatttgaagatgatgatgacagtgatgatgaaaaatatgat
gatgattggtggaaggcagttttgaaactgttgagactgatggcagagtcaggagaagag
ctgtgtttgataccaaatgtagacaagatgaaatctaatgatgatgatgatgaatttgaa
gatgatgatgacagtgatgatgaaaaatatgatgatgatgatgatggtggagatgataat
gtagatgaagataatgatgatatcagtgatgatgatgacgaagatgaggatgatgatgaa
gattctgaagaagagagtgatgctagtaaagtgatgaagaaacagattagaaagagcaat
atctctggggaaccaagtcttgcctttgatgactctgattcagatgaaggtgaagaggat
gatcaaactgtaaaaaagttgaaaaaatcagataattctgatgatgaagatgatgatgat
gacggtgatgatgatgatgatgacagttgtaataagtgtgaaaaaaatcagagtgtaaat
agaaataataaaaatggcagctctctattggttaatagtgaactgaaaagtgttaagaaa
agaaaattgagtaatataacaaattccagaagaattgctagtatggaggcagtgcagaat
atagatgataatttgactagtaaaactggtaatgataacttgactagtaaaaataaacag
gaagcaaatacaattgactctgacagttcagatgaaggtgactctagtgacagtgatatt
atatcttttaaacctacaaaagaaaaatcaagtcctctaaaagcaacagaagttaaacca
agcaaaactgaagaagttgataaacagaaagatacatctgataatgtaaaaagtgggaaa
tcattatcacagaaactgctgacattgtccgagacagattactttatgttgaatgctaag
aagaagtcagaggattcactggaggaaaaggaacctgagaaaactgtagataatgatgtc
agtgatggagatgaagtgagtgaggatgaagaagatggatcagagatggacgatgaagat
gaggaggaagagggatcatttcgctggaagcatgatttagcatcccaggcagcagcaaac
ttcagacaaagacaagctggtagaattaactacagaaaacttatatatggcaaagatgag
gaggaagctgttggtgatgacgggggtgatgatgaggatgagattggagggctgtttaag
gtgttgaaacagaagagtgaggcacaggctgtcgacaggatagctgttaacagtacagat
tgttctaaatgcttgaaaaatacactaatacagttagaagtggataagatacaggaattg
atagcagactgttttgttactggtaaatgggatgaaaataaagatgctgaggcgttgttg
caaaaagatgatgagttgtacggggactttgaagatcttgagacgggtgaaatgcacaaa
ggaaagaaagaagacaatgatgatgatgataatgatgatagtcctgatgatgatgatgat
gatgatgatattggttctgatggggaaaaaaagaaacaaccagaagagttaaaaaagaaa
aaggcagacatgacggcggaggagagacgtgtggagaagaagcgtaaactgaaggaaatg
tttgacacccagtatgatatgaagggagatacagagttctatgataattggaaagaagag
ctcgatcaacaggccaaaatgaatcgtgcagtgtttgaggacatggatgatgagttgagg
gttcagtatgaaggcttcagaccaggcatgtatgtgagggtagagatccacggggtgcca
agtgagtttgtcaccaactttgatccaacatatcctgtcattcttggaggattgctaagt
gtagaaaacaatgttggatatgtacaggcaagactgaaaaagcacagatggcataagaaa
atattaaagacgaaaaaccctttaattatctcgcttggttggaggagatttcagtctata
ccactatattctatacaagatcataatatgagaaatagattactgaaatacacacctgaa
catctacactgtaatgcttccttctggggtcctattacccctcagggtactggtttgtta
gctgtagaaagtgttgcaaatgttacagctgatttccgtatagctgcaacaggtgtagtt
ctagagcttgacaagtcacagcaagttgttaaaaaattgaaattaacaggaacacctcaa
aagatatacaacaaaacagcttttatccagggtatgttcaattctgcacttgaagttgct
aagtttgagggagcaagtgttcgtactgtcagtggggtcagaggtcagatcaagaaagct
gcaaaaacacctgaaggggcatttagagctacgtttgaagataaaattttgctaagtgat
attgtgtttatacgaacctggtacccagtagatgtgccacaattttataatccagtaacc
agcctgttgttaccaaagaatgaaaaacagggctggactggattgaagacactgggacaa
ttgcatagggagaaaaatatgaaacctacattttctgatgattctgtttataagaaaatt
gaaaggaaaggaaaaggttacacaccattatctgtaccaaaagctctccagaaaatcttg
ccgttcaaggatacgccaaagtcattactggcaaagaaggatcctgttcagcgtgtagcc
attctgagagaacctcatgaggccaagattgctaaaatgatgtctatgttgaaatctgtg
cacgagcataagaagcgaactgagcgtgtaaaaatgcgtgagagagtgaccaaacatcat
aaacaagtgcagaagatggacttagtaaaacagaagaagaacagggaggcaaaaaaagaa
gtatttagagtgcttggaaaaatggaaaacaggaaaaatagaaataaacgggattaa
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