Ruditapes philippinarum (Manila clam): 132731213
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Entry
132731213 CDS
T09557
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic-like
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132731213
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132731213
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132731213
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
132731213
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132731213
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132731213
Prokaryotic type
132731213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DUF7424
Motif
Other DBs
NCBI-GeneID:
132731213
NCBI-ProteinID:
XP_060573331
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MQAFNHGICRNCFRKLAKLRLMCMSITSQKRLYSCEWKSKDVRKQFIDYFRQKNNHEFVK
SSSVLPCKNAGTYFTNAGMNQFKPIFLGTVPEGSDLGRHKRVVNSQKCVRVGGKHNDLDD
VGRDLTHHTFFEMLGSWSFGDYFKKEACSMAWTLLTEVYKLPLQQLYFTYFGGNSVLGIS
PDLQCKEIWLELGVPEAHILPFGMDDNFWDMGETGPCGPCTEIHFDHVGNRDASSLVNMD
SPEVVEIWNLVFMQYNRLGPERLVPLPSTHVDTGMGLERICAVLRGTMSNYNTDLFLPIF
DVIQKETNVAVYKDETGSSDADKINTAYRIIADHVRMATVCISDGLLPGKEDLEVKLRGV
IYRALYQCHQIMKANPGLLGKLVNPVAESLGETYPEISTHAKKVKEVLDVTEDRYIQSLS
DGRKNFLKLKKKNPNLTKLNVEYIKRLHDGYYGNIVSTEMIELIAPEYGLKIDVEDLKSY
FEYRHGAHVTPTEVEYPCFTAELLNDLYNNNIPVTTDSHKYEYTKSAGGKYEFPVIEGRI
ECMVDDCNKLSKSVSERSTVAVIVDKTQFYAEKGGQVGDKGLIKTQTGMVQVYDTQSSHD
YVLHIGHVIQGHVETSQPASLSLDSDWRVGCTRNHTATHLVNSALRQVIRSDVTQSGSTV
TCNKLTFDFSCWGTFSDEDIQKVDKLVNRTIEEKIPVQRNLVPLKQALETRGMVYLDNVV
YPSEVYAVTVEGQGREDSCVSKELCGGTHVFNTGDLEDFCITSVQGQTSGTKTIVCLTGE
PARQAKQLAEQVECLYTDLTIKVKEENLKQCTELQKQINTVLGTDMLPKLFKDKMTNKIV
AIGTHINTLYNKQAFIQLQQDLLVGMNNEEEYIIYNFNMKVLPKLNKMMKSQIILKPLML
VVETSNKTVAYVAFPKSQEEDRSEVVKMLCDDVNGSVTQSEENYQLVSLKGKHTQQCIDC
CYKIMEGRRKDTIKF
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatttaaccacggaatatgtcggaattgtttccgtaaattagctaaattaaga
ttgatgtgtatgtctatcacatcgcaaaaaagactgtattcatgtgagtggaaatctaaa
gatgttcgtaagcagtttattgattattttcgccaaaagaacaatcatgagtttgtgaaa
tcatcgtcagtcttaccttgcaaaaatgcaggtacttattttaccaatgctgggatgaat
cagtttaaaccaatttttcttggaactgtgcctgaaggatcggaccttggaagacacaag
agagtggtaaacagtcagaaatgtgtgcgagtaggtggcaagcataatgacctagatgat
gtaggtcgtgacctcacacaccacactttctttgagatgctcggaagctggtcatttggt
gattatttcaagaaagaggcatgcagtatggcttggactttgttaactgaagtatacaag
ctcccactacagcagttatacttcacatattttggtggcaactcagtacttggtatatca
cctgatttgcaatgcaaggaaatatggctagaacttggggtaccagaagctcatatttta
ccatttgggatggatgataacttttgggatatgggagaaactggaccatgtgggccttgc
acagaaatacattttgatcatgttggaaatagagatgcttccagtttggtcaacatggac
tcacctgaagttgtggagatttggaacctggtttttatgcagtacaatagattgggtcca
gagaggttggtacccctgccttccacacatgtagacactggtatgggcctagagagaatt
tgtgcagtactacggggaaccatgtctaactataacacagatcttttcctgccaatattt
gatgttatacagaaggaaacaaatgtagcagtatataaagatgagactggttccagtgat
gctgacaaaattaacactgcctacagaatcatagcagatcatgttagaatggccacagtc
tgtataagtgatggactgctaccaggcaaagaagatctagaggtcaaattacgtggtgtg
atatacagagcattatatcaatgtcatcaaatcatgaaagccaatccgggtctcctggga
aaattagtgaacccagtagctgaatctctgggtgaaacatatccggaaatatctacacat
gccaaaaaggtaaaagaagtgttggatgtgacagaagatcgctacatacagtctcttagt
gatggaagaaagaactttctgaaactgaaaaagaaaaatccaaatttaacaaaattaaat
gttgaatacattaaaagactacatgatggttactatggaaacatagtgtcaacagaaatg
atagaactgattgccccagaatacggtcttaaaatagatgtagaagatttgaaaagttac
tttgaatatcgacatggagctcatgtgacccctacggaggtagagtacccatgttttaca
gcagaactgttgaatgatttatataacaacaatatacctgtcacaaccgatagtcacaaa
tatgagtacacaaaatctgcaggaggaaaatatgagtttccagtgattgaaggaaggata
gagtgtatggttgatgattgtaacaagttaagtaagtctgtatcagaacgttcgacagtt
gctgttatagttgataagacacagttttatgctgagaaagggggacaagtgggggataaa
ggcttgattaaaactcagacaggtatggtgcaggtatatgacacacaatccagtcatgat
tatgttctacatataggacatgttatacaaggtcatgtagaaacaagtcagccagcatca
ctcagtttagattctgattggagagttggatgtaccaggaaccacacagcaactcatctt
gtaaactctgccctacgacaagttattagaagtgatgtcacacaaagtgggtccactgtt
acctgtaataaactaacatttgacttctcatgctggggcactttttctgatgaagacata
cagaaagtagataaattagtaaacagaactatagaagaaaaaattccagtacagagaaat
cttgtacccttgaaacaagctctagaaactcggggaatggtttatctagataatgtggtg
tatccaagtgaggtatatgctgtgacagttgaaggtcaaggtcgggaagattcctgtgtt
tctaaagagttgtgtggagggacgcatgtatttaacacaggtgaccttgaagatttctgt
attactagtgttcaaggtcaaaccagtggtactaaaactattgtttgtctaacaggggaa
ccagccagacaggcaaaacagttggcggaacaggtagaatgtttatatactgaccttaca
ataaaagtgaaggaagaaaacttaaaacagtgtacagagttacagaaacagataaacacg
gtactgggaacggacatgttaccaaagctgttcaaggataaaatgacaaataaaatagtt
gctataggaacgcacataaatactttatacaacaagcaagccttcatacagctacaacag
gacttgttagttggaatgaacaatgaagaagaatatattatatataactttaatatgaaa
gttttaccaaagctaaacaaaatgatgaaatctcagataattttaaagccattgatgctg
gtggtggagacatcaaataaaacagttgcttatgttgcatttcctaagagtcaagaagag
gataggtcagaagtggtgaaaatgttgtgtgatgatgttaacgggagtgtgacacagtcg
gaggaaaactaccagttggtttcattaaaaggaaaacatacacaacaatgcatagactgt
tgttataaaataatggaaggcagaaggaaagatactataaaattttga
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