Ruditapes philippinarum (Manila clam): 132731293
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Entry
132731293 CDS
T09557
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132731293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132731293
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
132731293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_18
TIP49
AAA_14
AAA_2
AAA_22
Rad17
IstB_IS21
AAA_5
AAA_28
AAA_33
nSTAND3
ABC_tran
NPHP3_N
Mg_chelatase
ATPase
AAA_17
RNA_helicase
TsaE
Viral_helicase1
Zeta_toxin
NACHT
AAA_7
Motif
Other DBs
NCBI-GeneID:
132731293
NCBI-ProteinID:
XP_060573431
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
VFQDLQCDVDNKNNDNTVIPQDSDSSTYVKQDTNTVVTEPGTSTDLTPSSYSSQPGTSLD
NNVSISSSVIEQTVANVHLTLPNVIFEQTGSSVEKPGSAYSVSENVTQMASIPDINISGG
NCNEITEENGDDESVNEETRDLNRLKDDSRTIGNNAGVDSEIIIVSNSLNNNKGDKALLS
DINITMATSESKMEVDNEQAEDVGKIGETKMESARNKAVVKSTVSNEYTLVLSWLKEHPP
LTEEQLTGLFITMDDFKEALRYVQPSAKREGFATIPDVTWDDIGALHEVREELTLAILAP
VRHPEHFKSLGLTRAQGILLAGPPGCGKTLLAKAVANESGINFISVKGPELLNMYVGESE
RAVRTVFQRARNSSPCVIFFDELDALCPRRSGHSEGNSSARVVNQLLTEMDGLEERKQVF
IMAATNRPDIIDPAVLRPGRLDKTLYVGLPTASDRLDILKCITKNSTKPCLSDDVNLTSI
AEDIRCDCYTGADLAALVREASISALKEAILDKERQPNDVIVVNRGHFDCAFMKVKPSVT
LKDQEKYDSMRNKLAIGS
NT seq
1678 nt
NT seq
+upstream
nt +downstream
nt
ggtattccaagacttacagtgtgatgtggataacaaaaataatgataacacagtcattcc
tcaagattctgattcgtccacctatgtcaaacaggacactaatactgttgtaactgaacc
tggtaccagcactgatctgactccaagctcttattcttcacagcctggaaccagtttaga
taataatgtctcaatttctagctcagttattgaacaaactgttgctaatgttcatttgac
cttacctaatgtgatttttgagcagactggttctagtgtagaaaagccaggctcagctta
ctctgtaagtgaaaatgttacgcaaatggcatctataccagatataaacattagtggagg
aaattgtaatgaaattactgaagaaaatggtgatgatgaaagtgtgaatgaggagactag
agacttgaatagattaaaagatgattcaagaactataggcaataatgctggtgttgatag
tgaaattattatagtgtctaatagcttaaacaataataaaggagataaggctctgttaag
tgatattaatattaccatggcaactagtgaaagtaaaatggaagtagataatgaacaagc
agaagatgtgggaaaaattggtgaaaccaaaatggaaagtgctagaaataaagctgttgt
aaaatcaactgttagtaatgagtatacattggttctgtcatggttgaaggaacaccctcc
tttaacagaagaacagctcactgggttatttattactatggatgactttaaggaagcttt
gagatatgttcagccatcagcaaaacgtgaaggttttgcaacaataccagatgttacatg
ggatgatataggggcactgcatgaagtcagggaggaacttacattggctatattggctcc
tgtacgtcacccagaacatttcaagagtttaggattgactagagcacagggtatattgct
agctggaccaccaggttgtggtaaaacacttcttgctaaggctgtagctaatgaatctgg
aatcaactttatatctgtgaagggaccagaacttctcaacatgtatgtaggtgagagtga
gagagcggtacgtacagtatttcaaagagcacgtaattcctcgccatgtgtcattttctt
tgatgaactggatgctttgtgtccaagaaggtccggccattctgaaggtaactcaagtgc
tagagttgtaaatcagttactgacagagatggatggtctagaggaaaggaaacaagtatt
tataatggctgccactaacagaccagatataattgacccagctgttttgagaccaggaag
actcgacaagaccctgtatgttggactacctacagcttcagataggctagatatactgaa
gtgtatcacaaagaatagcacaaaaccatgtttatcagatgatgtaaatttaaccagtat
tgccgaggatataagatgtgattgttacactggagcagatttagcagctcttgtaaggga
ggcttcaatttcagcactaaaagaagccattttagacaaagagagacaacctaatgatgt
tattgtagttaatagagggcactttgattgtgctttcatgaaagtcaaaccatcagttac
attaaaggatcaagagaagtatgactctatgaggaataaacttgctataggaagttga
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