Ruditapes philippinarum (Manila clam): 132731350
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Entry
132731350 CDS
T09557
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06754
roundabout, axon guidance receptor 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132731350
04515 Cell adhesion molecules [BR:
rphi04515
]
132731350
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132731350
Cell adhesion molecules [BR:
rphi04515
]
Immunoglobulin superfamily
ROBO family
132731350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
BiPBP_C
Ig_CD22
ATP-synt_I
Motif
Other DBs
NCBI-GeneID:
132731350
NCBI-ProteinID:
XP_060573502
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MMFLTGLKCIWIFCWISLSQADADPSANADPARNAANFQNGFQSSSSSSNPRITEHPQDD
FFAKNEPATLNCKAEGDPRPTITWYRNGKPVETNRENPISHRMLLDNGQLFFLRVIHSKN
NHPDIGEYYCNATNSKGSVISRTANIQIAVLKDTFVEEPSDTTTAVGQRVVLRCSPPRGK
PDPKVIWRKNGELVQTDDRIHITEEGNLEIDSVEKQDIGEFMCLAINTGGERQSRPAQLR
VLDVPVFHKLPKNVDVEEGADAQFFCDVTGDPPIKVTWSKHDGAISFGRARVLPDHTLRI
ENVESDDDGVYICTAENAAGSTQATARLVVFSSPTFLISPRDQVVAKGRTVSLQCVAQGH
PPPTVFWSKKSQENLMFPNRDSGHYSVAEDGTLRIEAVNETDAGVYICEALNIRGAAYAS
AKVEVKAESAFILPDHDTRPPPIITIGPQNQTLHVDSVAVLQCEADGDPKPIIRWYKNGR
PLLMSGPRYAKRDSGTLQISDLKMQDTGSYTCKAISETGETTWQAFLTVASNFGQETVKA
AALNLLPNPPTQPVVSDVTDTSVHLSWSPGIQTGQAQVLSFYVEYFAYETTDGWVVASTD
VKRESFTVDKLRRNTTYIFLVRAVNEYGVGYPSPVSESVRLLGYKPKQLKPQLSKEEIIR
QLSGDLVEIDYTHSINSSAISLNWRVLQAENIVEGYQILYREILDIRRLTYGEKKTIRVP
STVTTYMLTGLDSYSWYEIRVLAYNGKIQSQYSHPVKVQTAEQNYVPGAPQDVTVHKISD
NSVSVQWGPPDTTFKKYLMTGYKVFCVSADQKKNCSIQTDGHTFSTVISKLSGNQVFTIK
VAAVTSKGVGEWSSAFIVDGKGVQSVKLDGDSHVYSTPKSVTGEESGEEDLFKRSWFVGL
LIAVGGVMLWLLLCIFSVWLCKRKKHRKKMKDQRFYTGVPVHKGEESNRNNMLYPPQYAV
KDQRIHCTNDLDLPPELRVLLPGQNKKEQEDDSIYKMAGDGSFPELKTFYQRVDPVAPYA
TTALIQQQHLMKQRQQGIENMFRPINQGYIQHSEGSADSCQKPALSTDSNPDHSHNSHST
TDHNHSDHMSPTSDSGSHTTDENGLLIKQKKRSNSRKDNTTPKQAMNMNWSEMLPPPPEH
PPPSECGDPPLYSEVRGDSRSNTHSPMSPVSFSQLSACSCPNPHTQTPVSGWNMPVYSDN
ECPRCCSEKYYDPMTYCQDAYIRRTHSPRMQVLQHVNNRNIPNTGHTCSPRATPSVQYQY
SKPHKGYHSNCATPQGDKNKSNIKRASHSSHSDNEAPSIMPCLQSYKITPKSEKDYRFMH
EEWGPDPAPPCHCEHDSGMGMEEDGINIDRACQSSLPAIAPSDAVSNYNSRPNMSSSMQE
RYQRNCDSPTSEEADYATESDLEQSQEQTATYTGNTDHNTDCSSVQSSTCSSGDGTFLTE
EDFASAVARAAEMSGLTVIGTTVCDPSNKSKKERRARKQARPVSPGYSTDSNYGSIDMVR
KPYPKSQRKQQLIEQGKGKSNFQPVSECNSRVNNNGIYDTPYARTDYPMNITHPAFPLPP
TRFASLGRNPVQDGSNRMSPLDGSRSVDRGGYSSFVYPQNIIDMHLKEDIV
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttctaactggattaaaatgtatttggattttctgctggatatctctctcacaa
gctgacgcagatccctctgctaacgcagaccctgctcgcaatgcagcaaatttccaaaat
ggattccagtcgtcatcatcatcatcaaaccctcgcataacggaacaccctcaagatgac
tttttcgcaaagaacgaaccagcgaccttgaactgtaaggctgaaggtgatccacgaccc
acaatcacttggtacagaaatggcaaacccgtggagacgaatagggagaacccaatctca
cataggatgttactcgataatggacaattgttcttcctgcgtgtgatacattctaagaat
aaccatcccgatataggagaatattactgtaatgcaacaaactcgaaaggttcggtaatt
agccggacagccaacatacaaatagcggttttaaaggacacgtttgtagaggagccatct
gatactaccacagctgttggtcaaagggttgtactacgatgcagtcctccaagagggaag
cctgaccctaaagtgatctggagaaagaatggtgaacttgttcaaacagatgataggata
catatcacagaggaaggcaatctggagatagattcagtagagaaacaggatataggagag
tttatgtgtttagcaataaacactggtggtgaacgacagagtagaccagctcaattaagg
gtcctagatgtgcctgtttttcataagttacccaagaacgtagatgtagaagaaggggca
gatgcccagtttttctgcgatgtaacaggagatccacccattaaagtgacctggagtaaa
catgatggagccatcagcttcggaagggctcgagttttaccggatcatacattacggata
gagaatgtggaatcagatgatgatggggtctatatctgcacagcagaaaacgcagccggg
tcaacacaagccacggctagactggttgtcttttcttctccaacattcctgatcagtcca
agagatcaagtggtcgctaaaggacgtacggtgtcattgcagtgtgttgctcaaggacat
cccccacccactgtattctggagcaagaaatctcaggagaaccttatgtttccgaatcga
gattcgggtcattattcggtagccgaggatggaacattacgtattgaggcagtaaatgag
acagatgccggtgtttatatatgtgaggctctcaacattagaggagctgcatatgcgtct
gctaaagttgaagtgaaagcagaaagtgcattcattcttccagaccatgacactcgtcct
ccaccaattataaccatcggaccacagaatcagacattacacgtagactctgtggcggtg
ttacagtgtgaagctgatggcgacccgaaacctattatacgttggtataaaaatggccgc
cctcttctcatgtctggtccaagatatgctaaacgagactctggaactttgcagatttca
gacttgaagatgcaggacactggctcgtatacatgtaaggccatcagtgagacaggggag
accacttggcaagctttcctaactgtagctagtaactttggtcaggaaactgtgaaagct
gctgccttaaacttgctgcctaaccctccaactcagccagtggtcagtgatgtaactgat
acctctgttcacctgtcctggtcacctgggattcagactggtcaagcacaggtgttgtca
ttctatgttgaatacttcgcctatgaaactacagatggttgggttgtagcaagcactgat
gtgaagcgagagagttttactgtggacaaactgcgtcgtaatacaacatacatattcctg
gttagagctgtgaacgaatacggtgtcgggtatcctagtccggtgtcggaatctgtcagg
ttactaggttacaaaccaaaacaattgaagccccagttatctaaggaagaaatcattcgt
caactaagtggagatcttgttgaaatagattacactcattctataaactcttcagctata
agtctgaattggagggttttacaagcagaaaacattgtagaagggtaccagattttgtat
cgtgaaatcttggatattagacgtctgacatatggagagaagaagacaatacgtgttccg
tctacggtaacaacttacatgttaacaggactggatagttacagttggtacgagatacgt
gtcctagcttataatggaaagattcagtcacagtacagtcatcctgtcaaagtacaaaca
gcagaacaaaattacgtacctggagcccctcaggatgtgactgtacataaaatatcagac
aacagtgtgtcggtacagtggggaccacctgatacaactttcaaaaaatatttgatgaca
ggatacaaggtattctgtgttagtgccgaccagaagaagaactgtagtatacagacagac
ggacatacatttagtacagttatcagtaagctttcaggaaatcaggttttcacaatcaag
gtagctgcagttacaagtaaaggtgttggagaatggagttctgcctttattgttgatggt
aaaggagtacagtcagtaaaactggacggggactcgcatgtttatagtacacctaaatct
gttaccggggaagaatctggagaggaagacttgtttaaacgatcctggtttgtcggtttg
ttgatagcagtgggtggggtaatgttatggttactattatgtatattctccgtatggctg
tgtaaaagaaagaagcatagaaaaaagatgaaagaccagagattctatacaggagtgcct
gtacataaaggtgaagaaagtaacaggaacaatatgctgtacccaccacaatatgcagtc
aaagatcaaagaatacattgtacaaatgatctagatttaccaccagagttaagggtactt
ttaccaggtcagaacaaaaaggaacaggaggatgattctatatataagatggcaggagat
ggaagttttcctgaattaaaaactttctaccagagagttgaccctgttgctccatatgct
actacagcccttatacaacaacagcatctcatgaaacaaaggcaacaaggtatagagaat
atgttccgtccaataaaccagggatatatccagcatagtgagggatcagcagacagttgc
cagaaaccagctctcagcacagattctaacccagatcatagtcataacagtcactctacg
acggatcataaccatagcgaccatatgagtccaactagtgacagtggtagtcatacaaca
gatgaaaatggcctacttataaagcagaagaagagaagtaactcacgaaaagataacaca
acccctaaacaagctatgaacatgaactggtccgaaatgcttcctccaccaccagaacac
cctccaccgagtgaatgtggtgacccacccttgtatagtgaagtaaggggagacagtcgc
agtaacacacatagtccaatgtctccggtctcgttttcacagctgtcggcttgttcttgt
ccgaatccacatacacagacgccagtttcaggctggaatatgcctgtgtattcagataac
gagtgtcctcgttgttgctcggagaaatattatgatccaatgacttactgccaagatgca
tatatacggaggacacattcaccaaggatgcaagtgttacaacatgtaaataatagaaac
ataccaaatactgggcatacatgttctcctagagcaacaccaagtgttcaataccagtac
tctaaaccccacaagggatatcactctaattgtgctactccacaaggggataaaaacaaa
tcaaacataaaaagagcttcacatagctcgcatagtgacaatgaagcacccagtattatg
ccatgtttacagtcatataaaattacaccaaaaagtgaaaaagactatagatttatgcat
gaggagtggggtcctgaccctgctcccccatgtcactgtgagcatgattccgggatgggg
atggaggaagatggtataaacattgatcgagcatgccagtcctccctgccagccatagct
cccagtgatgctgtcagtaattataattcaagaccaaacatgtcttccagcatgcaggag
aggtaccagcgtaactgtgattccccgacatctgaggaggcggactatgctaccgagtct
gacctggaacaaagccaagagcaaaccgctacttacacaggcaatacagatcataataca
gactgcagtagtgtacagtctagcacgtgtagctcgggcgatggtacattcctcacagag
gaagactttgcaagtgctgtagctcgtgcagcagaaatgtctggtcttacagtgattgga
acaacagtctgtgatccttccaacaaatccaaaaaagagcgacgtgcacgtaaacaagca
cgtcctgttagtccaggatattcaactgacagcaactatgggtctatagatatggttcgt
aaaccgtatccgaaatctcaacgtaaacagcaattgattgagcaaggtaaagggaaatca
aatttccagccagtaagtgaatgtaatagcagggtgaataataatggaatctatgacaca
ccatatgcaagaacagattatcccatgaatattacccatcctgctttccctcttcctcct
acaagatttgcctcccttggtagaaatccagttcaagatggcagcaataggatgtctcca
ctagatggcagcaggagtgttgataggggaggctactctagctttgtttacccccaaaac
attattgatatgcatttaaaagaagatattgtttaa
DBGET
integrated database retrieval system
