Ruditapes philippinarum (Manila clam): 132731377
Help
Entry
132731377 CDS
T09557
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132731377
04082 Neuroactive ligand signaling
132731377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132731377
Ion channels [BR:
rphi04040
]
Ligand-gated channels
GABA-A
132731377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132731377
NCBI-ProteinID:
XP_060573534
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MMILLLFNFFRYAWSQFPTYAENTTDVLDKLLTGYRKEIRPGFGGPPLVIETDILIRSIG
QISESDMDYSFQCYFRQRWTDERLQFDIRNISEVTLNNLFLENIWKPNTYFLNGQKSHQH
NIPRPNLFVRIRSDGRVYLSRRLTVKAACPMKLNLYPMDRPICSLVLGSYGYTTDDIVYL
WKYGNNISVEVNKDVRLAQFDLISVRSSNHTDNTVFGTFSVLKVYIYFERHLGFFVLQTY
LPCSMITCLSWVSFWINRDAAPARVLLGVTTILATAGIGMTVREGLPRVSYATALDTYLN
ACVLYEMAAMIEYAAVNYFTKVLPVDGGVSSDEDEEEIVPLAPPDQSVRVYLYQDTSNGQ
SVPLSDVQPTTEAFQGTTSHRKTRNRRKKESSFSNLFFKCLTGNLKYRTKLRERGNAEAG
NSASNIDVWCRYLFPGTFLVFNVSYWICYLAIL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatgatattactgttatttaactttttcagatatgcatggtcacagtttccaacctat
gcagaaaatacaacagatgttttagacaagttactgactggttaccgcaaagaaataaga
cccgggtttggaggtccaccacttgtgattgaaacagatatactgataagaagtattggt
cagatttcagaaagcgacatggactactcctttcagtgttacttcagacaaagatggaca
gacgagaggttacagtttgacattagaaacatcagtgaagtgacgcttaataatttgttc
ttggagaatatctggaaaccaaatacatatttcctaaacggccagaaatcacaccagcat
aatattcccagaccaaatcttttcgtacgtataagaagcgatggacgagtatatttgtcc
agaagactaactgtaaaagcggcgtgtccaatgaaactaaatctttatccaatggacaga
ccaatttgctctcttgtattaggaagttacggatatacaacagacgatatagtatactta
tggaagtacggcaataacatttctgtagaagtcaataaagatgtacgtcttgcacagttt
gatctcatttctgtaaggtcaagcaatcatacggataatacagtattcgggacattttct
gttttgaaagtgtatatttattttgaacgacatttaggtttttttgttctccaaacatat
cttccatgcagtatgatcacgtgcctatcttgggtttccttctggataaaccgtgatgcg
gcgccggcgcgtgtacttttaggtgtaacaacgattctagcaacagcgggtatcggaatg
actgttcgggaaggtcttccaagagtgtcatatgcgacagctttggatacctatcttaat
gcttgtgttctttatgaaatggcggcaatgatagaatacgctgctgtgaactactttaca
aaagttttaccggtagacggtggagtgagttccgacgaagacgaagaggaaatagtcccc
cttgcacctccagatcaatcagtgagagtatacctttatcaagatacatcaaatggacaa
tcagttccgttatctgatgttcagccgacgacagaagcatttcaaggtacaacttcacat
cgaaaaaccaggaatagacggaaaaaagaaagttcatttagtaatttatttttcaaatgt
ctgacaggcaatctaaaatataggacaaagctccgggaacgagggaacgctgaggcagga
aatagtgctagtaacattgacgtatggtgcagatatctatttcccggaacattccttgtg
tttaatgtttcttattggatatgttatctagctatattataa
DBGET
integrated database retrieval system
