Ruditapes philippinarum (Manila clam): 132731380
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Entry
132731380 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132731380
04082 Neuroactive ligand signaling
132731380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132731380
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132731380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2909
pYEATS
BRI3BP
MH2
Mso1_Sec1_bdg
DUF1871
Motif
Other DBs
NCBI-GeneID:
132731380
NCBI-ProteinID:
XP_060573539
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MGFIYKYCVYFLTLYITSNIGYIHCASINDTNVLLRNLLDGYNKNVRPVENQTNAVHVNA
TFVLVTIQDLDEIRGILSVMGIMSMQWYDASMVWDPLAYGDVEYVMTSYKEVWVPELILI
NPADESDTLGKKWQRVFFNYFGFASWWPVDLIKSTCTLDVYRYPFDTQECGLSFSAWGYF
SGQVKLNPSSNEIDLSYYIESFTWTLAKSQVRSSADGTALEFILHLKRKPDFVIVNVLLP
LTFLSLLNALVFLLLPESGERISYCITVLLSIAVFMTIVSDTLPKSSEPVPVISYKLMVD
MITSALMTLVTILNLRVYYRNDGQNVPNWLKQLYIFVTCKRAKNGIHRNSTDVEKIKPDR
KLSMFDNNKKTLMWKRSNDDESNNSQTLFNRKMSAISVFNVEENVHEPVENTLVRMMSEA
EENSFDHVDVSWKNISNMIDGIAFVFFTLMSVCSFIVFFAITF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggattcatctacaaatattgcgtatattttctaacgctttacataacgtcaaacatc
ggatatatacattgcgcatctataaatgacactaatgtattactacgtaatttattagat
ggatataataaaaatgttcgaccagtggaaaaccaaaccaatgccgttcatgtaaatgca
acatttgtactagtcactattcaagacctggacgagattcgtggaatattgtcagtaatg
ggaattatgtccatgcaatggtatgatgcaagtatggtgtgggatcctttagcatatggt
gacgtagaatatgtgatgacgtcatacaaagaggtatgggtacccgagttgattctcatt
aacccggcagatgaatcagacactcttggaaagaagtggcagcgagttttctttaattat
ttcggatttgcttcatggtggccagttgatctaattaaaagcacatgcacattagatgtg
tacagatatccttttgacacacaagagtgtggcctctcattttctgcatggggatacttt
tctggtcaagttaaactgaatccctcgagtaatgaaatcgacttgtcgtattacatagaa
agttttacatggacgttagcaaaatctcaagtgagatcatccgctgatggtacggcatta
gaatttattctacatttaaagaggaaaccagactttgtgattgtaaacgttcttctacca
ttaacattcctcagcttactgaatgcacttgtgttccttcttttaccagaatctggggag
agaatatcttactgtataactgtgttgttatcaatagctgtatttatgaccattgttagt
gacacactgccaaaaagttcagagcctgtaccagttatttcatacaagttgatggttgac
atgataactagtgccctcatgactctcgttactatacttaatctgcgtgtatattatagg
aatgacggtcagaatgttcctaactggttaaaacagctttacatatttgtgacctgtaaa
cgtgcaaaaaatggtattcatcgcaattcgactgacgtggagaaaataaagcctgaccgg
aagctatcgatgttcgacaacaataagaagacacttatgtggaaaagatcaaacgatgat
gaatcaaacaactcacaaacactttttaaccgtaaaatgtccgctatttctgtatttaat
gtggaggaaaatgttcacgagccagtcgagaacacgttagtcaggatgatgtcagaggca
gaagaaaactcgtttgaccatgttgacgtgtcttggaaaaatatcagtaacatgatcgac
ggaatcgcattcgttttcttcacattaatgtctgtgtgtagttttattgttttctttgca
ataacattttaa
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