Ruditapes philippinarum (Manila clam): 132731630
Help
Entry
132731630 CDS
T09557
Name
(RefSeq) UV-stimulated scaffold protein A-like isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132731630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132731630
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
132731630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
132731630
NCBI-ProteinID:
XP_060573823
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MSELDEKICKQMESLVELLTTSGKPTLNPEIMKKFKKFCRISDSYVHHAFELLMKQLSVK
HAEVRFSAYQMIDELFTRSHMFRELLLADFDTFLELAAGTEKKKPLPAPKAVAENMKNSV
NRSILLWVEKFGHAYRKLMLGFEFLKSIKKIDFDGIQATLDLERRQKEETERKLEECRKE
KVDKVSTEYAESELEIQLCLTEVENGLQLLMPGPDDFFIPLKDTGGTSMLSHSTSSVTST
VTSSEETITNNDDISVSIHLTDKDMGIENVKNNTHNISGTDISQENNDSEDDNDDFEEVD
TDVNSAFTQEHGLFDRKFALTVELGESGRSLKETEDNRDLIQGVRDQYTLIKTKYLPAVK
RWIQVMTENSGKEEKVKQLMEVKSKLEDSVKKCVELEIARSKRNRDADSDSDEDDFEDVP
EKEGYEEDIPEHVQMEAAMASSSKASKPKKKRAPKKPKIESKSGKKKLGIKNVQQMARDI
LESQKLLEDDDLDSAVLKSRDVSSKSRCLMDDASLPFLHQSDTQKKHNIKQSSTSHTSVH
KPRIETQSAKGSSQKTEKSETQSNAACSQSSTLSQIETQSNNKLDSDNGDNSTDDGKDRK
SSLLEKAPFINFGVDLEHWENPDEIKAPAKNRFEGASRFWVAERDVDDQEAGGSEEVASL
TRRSFTYVGQFEPVKWKCRAPMSDGKLCERMDRVKCPFHGKIIGRDKGGVPSNPDDVEHM
LSGKMKTDLDETTGNSSEGESTLSRSKGKGKGKAKKKKYPNLTEINESKNNCRSRLEAKI
FNRSTLRKVNKALDAETLKKLSNKFSHQFNYSLK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacttgatgagaagatttgtaagcagatggaaagtcttgtagagctgttgaca
acgtcaggaaaacctacattaaatccagaaattatgaagaaattcaaaaaattttgcaga
atttcagacagctatgttcaccatgcgtttgaacttctgatgaaacagttatcagtaaag
catgcagaagttcggttctcagcataccagatgatagatgagctatttactagatcacac
atgttccgggagttacttctcgctgattttgatacattcttggaacttgcagctggtaca
gagaagaagaaacctctgcctgcaccaaaagctgtagctgagaatatgaagaacagtgtt
aacagaagtatactactgtgggtagaaaaatttggacatgcttacagaaagctcatgctt
ggttttgaatttctcaagtccattaaaaagattgactttgatggtatccaggcaacactt
gacttagagagaagacagaaagaagaaacagagagaaaactagaagaatgtagaaaagaa
aaggtggacaaagttagtacagagtatgcagaatcagagcttgagatacagctgtgtctg
actgaagtggaaaatggtctccagctccttatgccaggtccagatgatttcttcatacct
ctgaaagacacagggggaaccagtatgttatcccattctacctcatcagtgacatcaact
gtaacatcatcagaggaaacgatcacaaacaatgatgatatttctgtcagcatacacctc
acagataaagacatgggcattgaaaatgtgaaaaataacacgcacaatatttcagggact
gatatctctcaggaaaacaatgatagtgaagatgataatgatgattttgaagaggttgat
actgatgtaaatagtgcatttacacaggagcatggtctttttgacagaaaatttgccctg
actgtagagttgggtgagagtgggcggagtctaaaggagacagaagataacagggacctg
attcaaggtgtgagggatcaatatacactcatcaaaactaaatacttacctgctgtaaaa
agatggattcaggttatgacagagaattctggaaaagaggagaaggtgaaacagttaatg
gaagtgaaatcaaaactggaagattctgtgaagaaatgtgtagaacttgaaatagcaaga
tctaaacgaaacagggatgctgatagtgactcagatgaggatgattttgaagatgttccg
gagaaagaaggatatgaggaagatattccagaacatgtacaaatggaagcagccatggca
tcaagtagtaaagcttcaaaacctaagaagaagagagcacctaaaaaacctaaaatagaa
tctaaatcaggcaagaagaaacttggaataaagaatgttcaacagatggcaagggatata
ttagaatcacagaaattattagaagatgatgatttagattctgcagtactgaaaagccga
gatgtttcttcaaaatccaggtgcttgatggacgatgcttcactaccatttcttcatcag
tcagacacacaaaagaaacacaacatcaagcagtcatcaaccagtcatacctcagtacat
aaaccaagaattgagacacagtctgctaaaggcagttcacagaaaacagaaaaatcagag
acacagtcaaatgctgcttgttcacaatcttcaactttgtcacaaatagagacacagtct
aacaacaaattggattcagacaatggagacaattctacagatgatggcaaggacagaaag
agcagtctgcttgagaaagctccatttataaattttggggtggacttggaacactgggaa
aatcctgatgaaatcaaagcaccagccaaaaataggtttgaaggagctagcagattttgg
gtggcagagcgagatgtagatgatcaagaagctggcggctcggaggaagtggcgtcatta
acacgacggtctttcacttatgttggacagtttgaacctgtgaagtggaaatgtcgtgca
ccaatgtcagatggaaaattatgtgaaagaatggatagagtaaaatgcccttttcatggt
aagataattggcagagataagggaggtgttccttctaacccagacgatgttgaacacatg
ttgagtggtaaaatgaaaacagatctagatgaaactactgggaactcgtctgaaggtgaa
agtacgttatcaaggtcaaagggcaaaggtaaaggaaaggctaagaagaaaaaatatcca
aacttgacagaaataaatgagtctaaaaacaactgcagaagtagattagaagcaaagatt
tttaacagatcgacattaaggaaagttaacaaggctctggatgctgaaacattgaagaaa
ctgtcaaataaattctcacatcagttcaactatagcttaaagtaa
DBGET
integrated database retrieval system
