Ruditapes philippinarum (Manila clam): 132731686
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Entry
132731686 CDS
T09557
Name
(RefSeq) RNA-binding protein cabeza-like
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132731686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132731686
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132731686
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132731686
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132731686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
132731686
NCBI-ProteinID:
XP_060573883
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search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NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaacaatatgctgcacagtatcaaacaagtggacaagcaggatataactac
gcaggtgcttatggaactactcaagattcctctgcatatggacagcaaggtggggctgca
tatggctcagcgccggctggtcagacagcgtccgcaggaggctatggtggtcagacacaa
caggtagctggatatgcagggtatgatacctctgcttaccagcaacagggaagtcaggga
caagctgcaccacagagtcagtatggccagcaggcacaaggccagactggtgcacaggcg
tacagttcatatggttcgtatgatcaaagcggatatggccaacagcagtcatcccagggt
tatggccaacaacagtctcaaggtggctatggacaaagtgcaggtggtcagcagtcccag
ggatcatacggaggtggacaacagagtagctatgaccaaccagcaggtggcggaggcagt
gccggtagttatggaggttcagcctcaggaggaggaagttatggaagtcaaggacaatcg
ggagggtacggtggacagagtggcggttacggtagtggtggtggatctggtagctatggt
agtagctctggcggtggtcgtggaggtggtgggggatatggaggaggtggtagagacagt
gataatggtgggcgtggcagttatggaagtggtggaggaggaggtggtggtagaggaggt
ttcaccaaatttgggggtggaggtggaggaggaggtggaggtggctggggtggtgatcgc
gagctacaagaaaccccagacacagttttcatcacaggtcttagtgaaagcattgttgaa
gaggatctgcttgcacattttggcagtataggagtaatcaagatggacaaaagaactggt
aaacccaaagtatggatctataaagataagatgtctggtcgacctaaaggggaagccacc
gtcacttatgatgacccagaaactgctaaagctgctatcaactggttcagtgagaaagat
tttcaaggaaatgtaattaaggttcagattgctcaaaggaaagtgagtcagtttggtggt
ggtggacgtggaggcggtggtggtggcggaagaggaggaggtggcggcggtggtggattt
ggtggtggtcgtggcggagatagaggtggacgtggtggtggtggtggccgaggaggtgga
cgtgatggtggtggaagtcgtcaaggagattggaactgccctaatgaagattgtggtaac
aacaactttggttggaggaatgcctgtaatctctgtaacacacctagaccagatggtgct
ggtggtgatagtggtgactttggtcgtggtgggggtggtagaggtcgtggaggtggtggc
ggatttggtggtggccgaggaggcggcggtggtcgtggtggatttgacagagacagggga
ggtcgtggtggatttggtggtggtcgtggcggtgatagaggaggacgtggtggagataga
ggaggacgtggcggtggtggcggttacggtggtggacgtggcggtggtggtggaggaaga
gatgacaggcggtccagaaccatattaaatcatcatttctatcatcattcatacatgact
gtttga
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integrated database retrieval system
