Ruditapes philippinarum (Manila clam): 132731829
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Entry
132731829 CDS
T09557
Name
(RefSeq) DNA repair protein complementing XP-C cells-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132731829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132731829
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132731829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
132731829
NCBI-ProteinID:
XP_060574086
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MMDVEEDDNLMTVSKTSLPTSVDHSDAMAVLMHMEGPKQNYLAEKPSTSKASDVDNGEHL
SDDEEESDWEDVADHHGHDGNSPKKSQLPSGPVEITLDAPVIYRKKKKKGEFDLQAYFRR
QINKFKREVAMDIHKVHLLFLLARCQYLNNLCMEETVQAQVFSITLVTKELKLPPTKSCT
ESHVTRVLSWIQEKQHYLSDIMAESFSKVSTQLKITLICVALLRQVGFLTRFVTSLQPVP
FKESGSKSSSSKKGKSPKSSKGKEKGTTESKRSTSKSVNSKSGKKNISIKSEQSVKTEQI
KTEKMEIDEDVSNNRKGPKGGKLVKRRSSDRKCSKVSKNAYKEDASCDDEKLSDDNDDDY
VPNDVNTDDDQEMKHKRKRSKIKKETKISSDENDSVKEENLSDDDFEEDSILIRTQQLKK
ETSKSKNRKALSSDSDPDNIGVDNWTEVYIEREKKWLCVDCVKLQVMKPYEIENKATQPV
SYVVGITQEGYIRDVTARYASQWLTETRKHRVDNEWWDETLQPYKCPDKTRDQQEDHELS
SQLQQRPLPTSIGAFKSHPLYVLKRHLLKFEALYPDTAIPVGYIRGEPVYARECVHTLHS
RENWLKEGRAVRVGEEPYKFVKSRPKWNRPKEDPEAKDLELFGLWQTELYIPPPAIDGKV
PRNAHGNVEMFLPSMLPAGTVHLKVPALNKVAKKLDIDCAPAMVGWDHHCGFSHPLMDGW
IVCEEYKDILLAAWDEEQEIIREKEQQKREKRVYDNWRKLIRGMMIKERLKKRFDLEEKP
VEDGNKPDDIVKPDNKQQPAGTTNKVVEKATDKKHAWPQNRMVNKQQHVCAVEEL
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtagaggaggatgataatttgatgactgtgtcaaaaacttctctaccaaca
tcagtagaccattctgatgccatggcagtcctaatgcacatggaaggtccaaaacaaaac
taccttgctgagaaaccttctacctctaaagcaagtgatgttgataatggtgaacatttg
tcagatgatgaagaagaatctgactgggaagatgttgcagatcatcatggacatgatgga
aacagtccaaaaaaatctcagttaccaagtggaccagtagaaataaccttggatgcccct
gttatctacaggaaaaaaaaaaagaaaggggagtttgacctacaagcttacttcaggcgt
cagataaataaatttaaacgagaagttgctatggatattcacaaggtgcatttattattt
ttattggcaaggtgccaatatttgaacaatctgtgcatggaggagactgtacaagcacaa
gtgttttctatcaccttggtaacaaaagaattgaaattaccccccacaaagtcatgtaca
gagagtcatgttacacgggtattatcctggatccaagaaaagcagcattatttgagtgat
ataatggcagaaagttttagtaaagtttctacacagttgaagattacgctgatttgtgtg
gctttactgcgtcaagttggttttctgacaagatttgtgacatcacttcagcctgtaccg
tttaaagaatcaggaagtaagtcaagttcttcaaagaaaggaaaatcgccaaaatcttcg
aaagggaaggaaaaaggtacaactgaaagtaaaagatctacctcaaaatctgtgaacagt
aaatcagggaagaaaaacatctcaattaaatctgaacaatctgtcaaaactgaacaaatc
aaaacagagaaaatggaaatagatgaagatgtaagtaataatagaaaaggacctaaagga
ggaaaactagtaaaaaggagaagttctgacagaaaatgttccaaggtctcaaaaaatgct
tataaagaagatgccagctgtgatgatgaaaagttaagtgatgataatgatgatgattat
gttccaaatgatgtcaacactgatgatgatcaggaaatgaagcataaaagaaaaagaagt
aaaattaagaaagaaacaaaaatatcttcagatgagaatgattcagtaaaagaggaaaac
ttgtcagatgatgattttgaagaggacagtattttgattagaacccagcagttgaagaaa
gagacatcaaaatccaaaaataggaaggcattatctagtgattcggacccagacaacatt
ggtgttgataattggacagaagtttatattgagagagaaaagaaatggttatgtgtagac
tgtgtcaagttacaagttatgaaaccatatgaaatagaaaataaagctacacaaccagtc
agctatgtggtaggaatcacacaagagggttatatacgagatgtaacagcaaggtatgct
agccagtggttaacagagacaaggaaacatcgtgtagacaacgagtggtgggacgagaca
ttacagccgtataaatgtcccgacaagacaagagaccagcaggaggatcacgaactgagc
tctcaacttcagcagcgccctctacctacatctatcggagcatttaaaagtcatccatta
tatgttttgaagagacatcttttaaagtttgaagctttgtacccggacactgcgatacct
gtaggatatatacgaggcgaaccagtttatgctagagaatgtgttcatactcttcattcc
agagaaaattggttaaaggaaggcagggcagttagggttggagaagaaccgtacaagttt
gtgaaatcaagaccaaaatggaatcggccgaaagaagatcctgaggcaaaagatttagag
ttgtttggcctgtggcagacagagctgtatataccaccacctgctattgatggtaaagta
ccaagaaatgctcatggtaatgtagaaatgtttctaccttcaatgttacctgcagggacg
gtccatttaaaagttccagctttaaacaaggtggctaagaagttagatatagactgtgca
ccagctatggtcggctgggatcatcattgtggtttctcacatccactaatggatggttgg
atagtatgtgaggaatataaagacattctattagctgcctgggatgaagaacaagaaatt
attagagaaaaagaacaacaaaaacgagagaagagagtttatgacaactggaggaaacta
atcaggggaatgatgataaaagaaaggttaaagaaacgatttgatctggaggagaaacca
gtagaggatggtaataaacctgatgatatagtaaaacctgacaataaacaacaaccagca
ggtacaacaaataaagttgtagagaaagcaacagacaagaaacatgcctggcctcaaaat
agaatggtgaacaaacaacaacatgtatgtgctgtagaggaactctga
DBGET
integrated database retrieval system
