KEGG   Ruditapes philippinarum (Manila clam): 132731895
Entry
132731895         CDS       T09557                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03013  Nucleocytoplasmic transport
rphi03015  mRNA surveillance pathway
rphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132731895
  09122 Translation
   03013 Nucleocytoplasmic transport
    132731895
   03015 mRNA surveillance pathway
    132731895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132731895
   03041 Spliceosome [BR:rphi03041]
    132731895
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     132731895
Spliceosome [BR:rphi03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    132731895
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 132731895
NCBI-ProteinID: XP_060574176
LinkDB
Position
Unknown
AA seq 159 aa
MSLLKPTAGSADISSYRDQHFKGSRTEQEKLLKQSCTLYIGNLSFYTTEEQIHELFSRCG
DVKRIVMGLDKVRKTPCGFCFVEYYIRGDAENAMRYVNGTRLDDRIIRTDWDAGFKEGRQ
YGRGKTGGQVRDEYRTDFDEGRGGYGKIVSNKIRPRDSL
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcacttttaaaaccaactgctgggtcggcagacataagttcatatagagatcagcat
tttaagggaagtaggacagagcaggaaaaattattaaagcagagctgtactctgtatata
ggaaacttgtcattttacacaacagaggaacaaatacatgaactttttagcagatgtgga
gatgtgaaaagaatagtcatgggactagataaagtgaggaaaacaccctgtggtttctgc
tttgttgaatattatataagaggtgatgcagaaaatgctatgagatatgttaatggtacc
cggcttgatgacagaattatcagaactgattgggatgctggattcaaggaagggagacaa
tatgggagaggaaaaactggtggtcaggtgagagatgaatatcgtacagactttgatgaa
ggtcgtggcggctatggaaaaattgtttctaataaaatacgaccaagagattctttgtga

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