Ruditapes philippinarum (Manila clam): 132732021
Help
Entry
132732021 CDS
T09557
Name
(RefSeq) phenolphthiocerol/phthiocerol polyketide synthase subunit C-like
Organism
rphi
Ruditapes philippinarum (Manila clam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
adh_short
KAsynt_C_assoc
PS-DH
CurL-like_PKS_C
PKS_DH_N
PP-binding
Thiolase_N
RhiE-like_linker
DUF2620
VipE
Motif
Other DBs
NCBI-GeneID:
132732021
NCBI-ProteinID:
XP_060574342
LinkDB
All DBs
Position
Unknown
AA seq
2128 aa
AA seq
DB search
MGDLQDIAIVGIGCRFPGADNLEEFWRVLRNGENHVKEVPASRWNLDVFFDPDPNTPGKT
YVRNAGFVKGVEEWDHRFFGLNDMEAELVDPQQRLVLECVHMALEDGGIRRNDIDGSDTA
VYIGSMTDDYKGHVMDDVGLSSAYSVTGTHNSIISARVSYNYNLLGPSLTLDTACSSSLV
AIDLASQSIHTGICTLAICGGVNVLLDPQMFIALAKARMLSPSGQCKTFTKEADGYARGE
GCGIVILKKLKQAIKDGNKIWSIIKTGVNQDGHMTTPITAPSGLQQERLIKRTYARYNID
TSCIQVIEAHGTGTLIGDPTEINALGAHFGKKANSQSPVYVGSVKTNIGHLEAAAGVAGL
IKVLLMIKYHTIVPSLWYKKDNENPKLKMSDHGFIVPTECTNWCKSESEKRLACVNSFGF
GGTNAHAIIEEYQESKHGISSAVGTINTFPYIITFSAIDRYSLKENMQSTRNALESNSYD
LSSLSCTSTCKRDHFKERKAVFGKTQEEIMSALKKSLEADDEPVKVTMTKRIVFVFCGVG
TSWKGMCNSLMKIKAFRSAVKQIDQVLQPLSGWAVAELFQNSLDFQADPMKAHIAIFACQ
VGLTMLWKHIGITPDAIVGQSVGEVAAAFAANYFDLETAVNIIYNRSKVLASVNQGGMIV
VSNVDVEIIEKLCQTVGSVIAVYNSPVSCTVSGSIDQVDRLKYQLSKPEYSKAKIIRLDV
KCAYHSHFVEQAALHLREQLEGMSCTEGNIAVFSTVTGRQESSYTIGKSSYWEKNVKMPV
LFSQAIKKASSDQSHDIFVEIGPSPVLRAHLDSILYSRTNYSIVLSMRKHSELDTITASI
CQLYQLGLEPKWNNINPCQTQCTDIPRNNLQKRRMFYQSQEAVMRINGFEIQKDDHLFIK
RFPENNGTASFRAEINEETTSFVFQHFVKREIVIPGATYADIGFEIGRTVKGLSKQDTII
SLEFLRPVKVKTKEKTSLDISTIKQRDGLLFHVKHADVTICKGWVHKTQLDEMSETIVDV
DLIRTTISSAECRRMGENEMYGYLMSLGFQYGICFKLLKSCVTNGVECLTEVELPDVLMS
DLQLTTIHPCILDAMVQSTINVTTEELFDKIKAEKLSFLPVAMGKIHVRKSPERNMYLYT
KRTNTTLLDSVFQLHYNILLINNDGFVIAEVQNYTTYGKRNGLTAPCELKYDLTWHDFNL
PLEKARQRANILILSTAEISEMKNHLDDIGHTFIAKATRNMSGDDVGKVFKVAKSHWKSV
TNTDAVLLVIDKFETSSITHECAEYIHSIVRENCLFLSTVVKYMVSKGMSIPIYIATQNT
QLSLSNLYENLSLVGEELWGFVRSVNIEFIYGVITLIDLQPSLSETISTLLNFVSSSCRN
PDTVNTEIIIFKNKTYGAQFTKVPRKNVLPKLRNEVALLEKSMLPHKILTDRSIKVGTLY
VCESSGEEYRRKNDNLLLKLNRVCVHPVCIYPRTSSGIDLDQDIWKDTIKDGHELLGIEY
TGYKLYRNKKGKSSCTEPKVDDEIKNDFSNRWEIVCIYPSKLLTEMNIPEECTVLLKDLK
VYIPGLLLYTVISFRLCEFVPRGSKVVIHNNDEPTSGNFLLTCILQTCKSCKVISENMNV
GNSAGIDYLVSIDQIDESCVAVGKCKSIICIDGCIKGSLRMKISRSKDQRLTCLSVAHLL
ERKHISKCLPKAVDWIQQNVHKVSKMQYSRSMHNDQKCCIPCPTTDIVSNGRLLLPIRKP
LQSLFNKSSVYIVTGGMTGLGWELAVLLAEMGAGTIATFSRRKIPEEKLTQIEGIMKKTG
CKIFGIQADVTKLESVENAISEAERLSQGNKIQGVFHCAGVLEGKLLTQLEKSQLDYVLR
PKVIGTLNMHIATMKHKLHYFVVSSSINSLIGSPGQASYGAANCFLDTFIDWRRSQGLTG
QSINWGALAIGMAARPEFTDNFEKRGFNLLSVSDIRSCFQDALMGNLTKTIYTDVNWNMH
AKDYDNPYMKRFRIRMSVFLEQEITELRQQSSDANHLYIDQQKLQNSSKAAQIEAITQVI
LKITGKVIWQDFHQLDSSTAIADLSLDSMSSVTFINIVQDVTGYRISPTFLLNTNNTLKD
VVLLLQEKMFNDKHTNDLKKTTQSNTYL
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttacaggatatcgctattgttgggatcgggtgtagatttccaggcgctgat
aatttagaagaattctggcgtgtacttaggaatggcgagaaccatgtaaaagaagtacca
gctagtagatggaatttagatgtattctttgatccggacccaaacacaccaggcaagact
tatgttcgcaatgcaggttttgtaaagggggtcgaagaatgggatcaccgcttcttcggt
ttgaacgatatggaagcagaacttgttgacccccagcagagactggttctagagtgtgtc
catatggcgctcgaagatggtggaataagacgaaatgatatcgatggttcggacacggca
gtttacataggatctatgactgatgactacaagggtcatgttatggacgatgtaggacta
agcagtgcgtattccgtaacaggaacacataacagtattataagcgcaagggtttcatac
aattacaaccttcttgggccttcattgacactagacactgcatgttcatcttctctggtc
gccattgatttagcttcacaatccatacacacaggaatctgtacattggctatatgtggc
ggagttaatgttcttctggatccacaaatgtttatagcattagcaaaagcaagaatgttg
tcaccgtccggtcagtgtaaaacattcacgaaagaggctgacggatatgccagaggtgaa
ggatgcggtattgttattcttaagaagctgaaacaggctatcaaagatggtaacaaaata
tggagtattataaaaacaggagttaatcaagatggtcacatgactacaccaataacggct
ccatctgggcttcaacaagagcgcttaatcaagagaacttatgcaagatacaatattgat
acgtcctgtattcaagtaattgaagcacacggaacagggacacttattggagatccaaca
gagattaacgcattaggagcacattttggaaagaaagctaattctcaatcacctgtttac
gttggatctgtgaagacaaacattggccatctagaagccgctgcaggtgtggcaggtttg
ataaaggttttacttatgataaaataccatacaattgtcccttctttatggtacaagaag
gataacgaaaacccaaaactaaaaatgtccgaccacggatttattgtccctactgaatgt
acaaattggtgtaaatcggaatcggaaaaacgtcttgcatgcgtaaacagttttggcttt
ggcggcactaatgctcacgcaattattgaggaatatcaagaatcaaaacatgggatttcg
tctgccgtagggacaattaacacgtttccttacataattaccttttcagctatcgacaga
tattccctgaaagaaaatatgcagtcaacaaggaatgctttagagtccaattcatatgac
ttatcgtcactttcgtgtacatccacgtgtaaacgagatcattttaaagaaagaaaggca
gtgtttggaaaaacacaagaagaaattatgtctgccttgaaaaagtccctagaggcagat
gatgaacccgtcaaagtaactatgacaaaaagaattgtgtttgtgttttgtggtgttggt
acctcctggaaaggaatgtgcaactcattaatgaagataaaagcctttagatcagcagtc
aaacaaatcgatcaagtgttgcaacctctgtcgggttgggcggtagcagaattattccaa
aattcgttagatttccaggctgatccgatgaaagctcatatagcaatttttgcctgtcaa
gttggacttacaatgctttggaaacacattggaattaccccagacgctattgttgggcag
tcggttggagaagttgcagcagccttcgctgcaaattattttgatcttgaaacagcagtg
aatatcatatacaacagatcaaaggtattggcatctgtcaatcagggaggtatgattgtt
gttagcaacgtcgatgttgaaattattgaaaagttgtgccaaactgtaggatctgtcatc
gctgtgtacaacagtccggtatcctgtacagtttcaggtagcatagatcaagttgatcgg
ttgaaatatcaactttcgaaaccagaatatagtaaggcaaaaattatacgcttggacgta
aaatgtgcatatcatagccattttgttgaacaagctgctttacaccttcgagaacaactt
gaaggtatgtcttgtacagaagggaatattgcagtattttcaactgtaactggtcgacaa
gaatctagttatacaattggaaagtcatcttactgggagaaaaatgttaaaatgccagta
ttattttcacaggctattaaaaaagcaagttcagatcagagtcatgacatatttgttgaa
atcggtcctagtccagttttgagagctcatttggatagtatcctatatagtagaacaaac
tattcgattgttctctctatgagaaaacacagtgagctagacacaataacagcatcaatc
tgtcaattatatcagttgggattagagccaaagtggaacaatattaatccatgtcaaacg
caatgtactgatattccaaggaacaatttgcaaaaacggcgaatgttttatcagagtcaa
gaggcagtcatgagaatcaatggatttgaaatacagaaagatgaccatttgtttatcaaa
cgattcccagaaaataacggtactgcatcatttagggctgagatcaacgaagaaactact
tcgtttgtgttccaacattttgttaaaagagagatagtaattccgggtgccacgtatgct
gatattggtttcgaaattggaagaacagtcaaaggactatctaaacaagatacaattata
tcattagagtttctccgaccagtaaaagtgaaaactaaagaaaaaacatctttagatata
tcaaccattaaacaaagggacgggctactttttcacgttaaacatgctgatgtgactata
tgcaaaggatgggttcacaaaactcaattggacgagatgagtgagacaatcgttgatgta
gaccttataagaacaacaatatcttcagcagagtgtaggaggatgggcgagaatgaaatg
tatggctatcttatgtcccttggatttcagtatggaatatgtttcaagcttctgaaaagc
tgtgttacaaatggcgttgaatgtttaacagaggtagaacttcctgatgtcctcatgtca
gatttacaattaacaactattcatccttgtattttagatgcaatggtacagtcaacaata
aatgttactacggaggaactttttgacaaaattaaagccgaaaagctatcgttcttgcca
gttgcaatgggaaaaatacatgtgagaaaaagccctgagcgaaatatgtatttgtacaca
aaacgtacaaacacgacattactagattccgttttccagctccattataacatattgctg
atcaataatgacggatttgtaatagctgaggtacagaattacactacatacggaaaacga
aatggcttaactgcaccatgtgaactaaagtatgaccttacttggcatgattttaatcta
ccattagagaaagcaagacaaagagcaaatattcttatactatcaaccgctgaaatttcg
gaaatgaaaaatcacctcgatgacattgggcacacgttcatcgccaaggccacgcggaat
atgtcaggagatgacgtcggaaaggtttttaaggtagcaaagtcgcattggaagtcagtt
acaaatactgatgcagttttactggttattgacaagtttgaaacaagttcaattacacat
gagtgcgctgagtatattcactcaattgtccgagaaaattgcttgtttctaagcacagtc
gtcaagtatatggtcagcaaaggcatgtccattccaatttatatagcaacgcaaaataca
caactctctctttcaaatttgtatgaaaatttaagcttagttggagaagaattatggggc
ttcgttcgttctgttaatattgagtttatttatggtgtcattacgttgatagatcttcag
ccatcactatcggaaacaatatccactcttttaaactttgtgtcaagttcttgcaggaac
cccgatacagtaaacacagagatcataattttcaaaaataaaacatatggagctcaattt
acgaaagtacctagaaaaaatgttcttccgaaactgagaaacgaagtagcattacttgaa
aagtcaatgttaccgcacaaaattttgactgacagatctattaaagtaggaacattgtat
gtatgtgaaagttcaggagaagaatatcggcgcaaaaacgacaacctcttgcttaaactg
aatcgtgtatgtgttcatcctgtttgtatttatcctagaaccagcagtggaattgacctc
gatcaagatatatggaaagatacaataaaagatggacatgaactacttggcattgaatac
acaggttataagctttataggaacaaaaagggcaaatcatcctgcacagaaccaaaggtt
gatgatgaaatcaaaaacgacttttcgaacaggtgggaaatagtatgcatctatccttca
aagttattaacagagatgaacatacctgaagagtgcacagtgttgctgaaggatctaaag
gtgtacataccaggccttcttttgtatacagtcataagcttcagattatgtgagtttgta
ccgcgtggatcaaaagtggtaattcacaacaatgacgaacctacttcaggaaacttcttg
ttaacatgtatccttcagacatgtaaaagctgcaaagttatttctgagaatatgaatgta
gggaatagtgctggcattgattatttagtatcaattgatcagattgatgaaagttgtgta
gctgtaggaaaatgtaagtccatcatatgtatcgacgggtgtataaaaggatcacttcgt
atgaaaatttcaagatcaaaagatcaaaggcttacttgtttaagcgttgctcacttatta
gagaggaaacatataagtaaatgcttaccgaaagcggttgattggattcagcaaaacgtt
cataaagtttcaaaaatgcaatacagcaggtcaatgcataatgatcagaagtgctgcatc
ccttgtccaacaactgatatagtcagtaatggccgtttacttttacccataagaaagccg
ttgcaaagtttatttaataaatcaagtgtgtatatagtaacaggtgggatgaccggactt
ggttgggaattggccgttcttcttgcagaaatgggagctggtacaattgcaactttctct
agaagaaagatacctgaagaaaaactcacacaaattgaaggaattatgaagaaaactggt
tgtaaaatctttggcatacaagctgacgtgactaaactggaatctgttgaaaatgcgata
agtgaagcagaacgtctatctcaagggaataaaatccagggtgtgttccattgtgctggg
gttctagaaggaaaacttttaactcagttagagaagtcgcaacttgactatgtattacga
cccaaggttataggcacattgaatatgcatattgcgacaatgaaacataaattgcattac
tttgtggtttcatcttccattaacagcctgataggatcccccggtcaagctagttatggt
gctgctaactgtttccttgacacattcatagattggaggcgaagccaaggcctcactggt
cagtcaataaattggggtgctcttgctataggtatggctgctaggccggagtttacggac
aattttgaaaaacgtggtttcaatcttttatctgtgtcagacatccgaagctgttttcaa
gacgcattaatgggaaatctgacaaaaaccatttacacagatgtaaactggaatatgcac
gccaaagactacgacaatccatacatgaaacgtttccgcattagaatgtcagtctttttg
gaacaagaaatcactgaattaagacaacaaagttccgacgcaaaccatttatatatagat
caacagaaattgcagaattccagtaaagcagcacagattgaggctattacccaggttatt
ctaaaaataacaggcaaagtcatttggcaggattttcatcaacttgattcttcgactgct
atagctgacctgtccctggactccatgtcatccgttacttttataaacatagtgcaggat
gtgacagggtacagaatttctccgactttcttgctaaacacaaataacacattgaaagat
gttgtgctcctcttgcaagaaaaaatgttcaatgacaaacatacaaatgacttaaaaaag
acaactcaatcaaacacatatttgtaa
DBGET
integrated database retrieval system
