Ruditapes philippinarum (Manila clam): 132732220
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Entry
132732220 CDS
T09557
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132732220
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
132732220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
132732220
NCBI-ProteinID:
XP_060574596
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MLTPAFELRQDKDFLTVIIKAPFAKVAETEIFIEEDDFKFYSKPYFLRLALPGKIVEDGR
EKADYNADNGEFVIVVPKQTPGEHFEGLDMLTKLLEAKGKKPAPSSLIEVIDDGTLEGTD
EADNDDDDELDEDFDWRIEQVPYKEQPKLTGAPKYGFANQKSGVFSRLQEDMVYIVDCSD
PDTMCVADRREERIQAENDKFDEDHYIADMYEDVLIKPLLDFQPHWCEEVDLVQGGTPVE
MAVELTEDEKEVMRKLPRKEYILDVTEETGVYLGLVDILYAYCYNHRTTEGENNCESGWT
ICKISSTLSWLEVFSSLEDVVRSCFRRSICYPLYRQWKLNQSVLKDVVTILQLGRRSVLK
VLLEIRGILMDQDCRYVLNDLYITDYCVWIQSASEKKLQSLWEALSKVFILIQFWKRLHF
LLYGAALSDFRIPKIKEICQYFLLKLKISKDDIGFNLPELEKLAQHAMLGEESSDLENLT
DRLSSIDVNKKNKSESDSESDESDTESDSDDIDSDDLSSSDDAGDDHHTEGDIRKVTGVS
GNGKSDIDCENKNIRETICAESQEFVGDAVDTGNSKVTDTHCRKGKPLIEEISDSTEDKE
SEQVKSLNSVGKSESTMIVEASAEQEK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaccagcgtttgagctgaggcaggacaaagatttccttactgtgattataaaa
gctccttttgccaaggttgcagagactgaaatattcattgaagaagatgatttcaaattt
tactccaaaccttacttccttaggttagcattaccagggaaaatagttgaagatggcaga
gagaaggctgattataatgcagacaatggagaatttgtcattgtggtaccaaaacagact
ccaggggagcactttgaaggtcttgatatgctgactaaactattggaagctaaaggaaag
aagccagcaccctcgtcattgattgaggttattgatgatggtacattggaaggtactgat
gaagctgataatgatgatgacgatgaattagatgaagattttgactggcgtatagaacaa
gtaccttacaaagaacaaccaaaattaacaggagctccaaaatatggttttgctaaccag
aagtcaggggtgttttcaagacttcaggaggacatggtttatatagtagattgtagtgat
ccagacacaatgtgtgtagcagatcgacgagaagagcggattcaagcagaaaatgacaag
tttgatgaggatcattacatagcagacatgtatgaagatgtccttataaaaccgttactg
gacttccagccacattggtgtgaagaagttgatcttgttcaaggtggaacaccagtggag
atggcagtggagttaacagaggatgaaaaagaggttatgagaaaactaccacgaaaagaa
tatattttggatgttaccgaggaaactggtgtataccttggactagtggatattctctat
gcatattgttacaaccatagaacaactgaaggtgaaaataattgtgaatccggttggacc
atttgtaaaattagttcgacactgtcttggttagaggtgttttcaagcttagaagatgtt
gtaagaagttgcttccgaagaagtatatgttaccctttgtatagacaatggaaactgaac
caatcagtattgaaggatgttgttactatattacaactaggtaggagaagcgtgttaaag
gtattactggagatacgaggtatattgatggatcaggattgtcgttatgtactcaatgac
ctctatataacagattactgtgtgtggattcagtcagccagtgagaaaaagttgcagtca
ttatgggaagctttatctaaggtatttattttgatacaattttggaaaagattacacttt
ttgctttatggggctgcactgagtgatttcagaatacccaaaattaaagaaatttgtcag
tattttttattgaaattgaaaatcagcaaagatgacataggtttcaacttaccagagctt
gaaaaactagcgcagcacgcaatgctcggtgaagaatccagcgatctagaaaacctgact
gacagattaagtagcattgatgtaaataagaaaaataagtcagaaagtgattctgaaagt
gatgaatctgacactgagagtgatagtgatgatatagacagtgatgatttatcatcatca
gatgatgcgggtgatgaccaccacactgaaggtgatataagaaaggtaactggtgtatct
ggaaatggtaagagtgatattgactgtgaaaacaaaaacattagggagacaatctgtgca
gagtcacaagaatttgtaggagatgcagttgatacaggtaatagtaaagtgactgataca
cattgcaggaaagggaaaccattaattgaagaaataagtgattctactgaagataaagaa
agtgaacaagttaagtcattgaattccgtagggaaaagcgaatctacaatgatagttgaa
gctagtgctgaacaggagaaatag
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