Ruditapes philippinarum (Manila clam): 132732323
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Entry
132732323 CDS
T09557
Name
(RefSeq) F-box/LRR-repeat protein 2-like
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132732323
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132732323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
LRR_At5g56370
F-box
F-box_5
LRR_R13L1-DRL21
LRR_RPS2
TRPM_tetra
Motif
Other DBs
NCBI-GeneID:
132732323
NCBI-ProteinID:
XP_060574707
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MASARLPVEVVSHIMRFLSVSDRKDAALVCRSWYEASLDPILQRDIIIHFYASSSEQTTR
AIPSLSRRRLPHLVLNNFDSSLDAKAVLLKSCEHLSANLRSLSLRGSNITERTFVELLSK
CTNLVTLDLSCCNSLFMSGSLLEKNTDMQLLKASLINVLDVNLSSIRYMSDATFNRIMTV
CENVEKLALAGTQMAFSSDVYYPNKSSRIASSSVLTFKNFLDFIVTQQCLTSLNLSKTQI
EDEHLEEIVAVSGLELQELILTGCRNISDEGIASICKHQAQLKSLDVRECADLTNSSLMT
VSTRLKQLQNLYVNKCKQITDKSVTSMSQLNQLEVLDISECFQITSVGLIKGICREGETT
VLTHLNLNCCSLVGDSFVEKACECLPLLTHLDLGSCFKITDHSVHSISSSLKYLRFLRLA
WCKEVTDLGLLGLLTEGNQHKHDETDGECRCTRKFPSTVIFKKPTDKKKESSVDEIRKNS
LNSQKNPVAISNLVGLKYLDLTACKKLTDTSLMQAVKFPEIRVLSLGILPDLTPEGVAQI
VRNNPSIEELNLSQCGSLTDSAMATITTRLPRLQMLNVFGCDKLTDKSVDYMKDNCKRLK
VLDVSFCGGLSHEAIENLENKCKTLQTVQKRMIGAS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcacggcttcccgtggaggttgtgagtcatatcatgcgttttctgtctgta
tcagacaggaaagatgcagccttagtttgtcgcagttggtacgaggcttcactagatcct
attcttcagcgtgacatcattatccatttctatgcttcttcctccgagcagacaacaaga
gcaatacctagcctgtcacgcagaaggcttcctcatctggttttaaacaattttgattca
tctcttgatgcaaaggctgtgcttctaaaatcctgtgagcatctgtcagccaacctgaga
agtttatctcttagaggaagcaatataacagagaggacatttgttgaactgttgtcaaaa
tgtacgaatctggtaacactagatctgagttgctgtaattctttgtttatgtcaggatcg
ttgttggagaaaaacacagatatgcagcttttaaaggcgtcattgatcaatgtcttagat
gtaaatttgtcttccattagatacatgtctgatgcaacatttaacaggataatgactgtg
tgtgaaaatgttgagaagctagcacttgcaggtactcaaatggcatttagtagtgatgtt
tactatccaaataagtcaagtcgtattgccagtagttctgtgctgacgtttaaaaacttt
ctagactttatcgtcactcaacagtgtctaacgtcattgaacttgtccaaaacacaaatt
gaagatgagcatttagaagagattgtagcggtgtctggtctagagttgcaggagctcatt
ctgactggctgtagaaatataagtgatgagggcatcgccagcatttgtaaacatcaggca
cagttgaagagtcttgatgttcgtgaatgtgctgatcttaccaactcgtctcttatgacg
gtttctacaaggttaaagcagctccaaaatctttatgtaaacaaatgtaagcagataacc
gacaaatctgtgacaagtatgagtcagctaaaccagcttgaagtgttagatatttctgaa
tgtttccaaatcacctccgtagggcttattaaggggatttgtcgggaaggtgaaacaacg
gttttgacacatttgaacttgaactgttgctcacttgtcggagattcattcgttgaaaag
gcgtgtgaatgtttaccactgttgacacaccttgaccttggctcttgcttcaagattacc
gaccacagtgtccactcaatatcctctagtctgaaatacctgagattcttgcgtctggct
tggtgtaaagaagttacagatttagggttgctaggtcttcttacagagggaaaccagcat
aagcatgatgagactgatggagaatgtagatgtaccagaaaattcccatcaacagtcatc
ttcaaaaaacctactgataaaaagaaagaatcaagcgttgatgaaatacgtaaaaattcg
ttgaattcccaaaagaatcctgttgccatcagcaaccttgttgggttgaaatatttggat
cttacagcttgtaagaaattaactgacacaagtttaatgcaagcagtgaaattcccagag
atccgagttctctctctaggaatattgccggacttgacccccgagggtgttgcacagatt
gtccgaaacaacccaagtattgaggagttaaatttgtcacagtgtgggtctttgacagac
agtgccatggcaaccataacaactcgccttccgagacttcagatgttgaatgtatttgga
tgtgataagctcactgataagagtgtcgattacatgaaagataactgtaagagattgaaa
gttttagatgtgtcattctgtggaggactttcacatgaagctattgaaaacctagagaac
aagtgtaaaacacttcaaactgttcaaaaaagaatgattggtgcatcctaa
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