KEGG   Ruditapes philippinarum (Manila clam): 132732344
Entry
132732344         CDS       T09557                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132732344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rphi03041]
    132732344
Spliceosome [BR:rphi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    132732344
 Complex B
    132732344
 Complex C
   U2 SnRNP specific factors
    132732344
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 132732344
NCBI-ProteinID: XP_060574733
LinkDB
Position
Unknown
AA seq 461 aa
MAAGPIAERNQDATVYVGGLDEKVSEAILWELFLQAGPVVNVHMPKDRVTQAHQGYGFVE
FMGEEDADYAIKIMNMIKMYGKPIRVNKASANQRNLDVGANIFIGNLDPEVDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFEAADSAIEAMNGQFLCNRAISISYAFRK
DSKGERHGSAAERMMAAKNPLSLTDRPHQLFADAPPPQQPPAPAGSVVPPPPPPVQQMAP
GQGPGGPVSSQQTSLPPPVPPPMGAPIPPPVSGAPPMMPPPVPPSGMPPFSGPPPGPMGA
PPFMPPGMARPPPPGPPPSSMANMPPQGMPPRPGMPPPPAPPMNPTSTSQQMGGYPPQPP
LSQQSNMGGPPPGMGPPPGMRPPPPGWRGPPPRGPPPPFGMRGPPPGMRPPPPGMGPPRG
PGMRGPPPPRGMRPPPPGMRGPPPPPPPSGGSNYDNYEGGY
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggctgccgggccaattgcagaaagaaatcaagatgccacagtttatgtgggcggtctt
gatgagaaggtatctgaagctattctctgggaactgtttctgcaggcaggtcctgttgtg
aatgtccatatgccgaaagacagggtaactcaggcacatcagggctatggttttgtagag
tttatgggagaggaagatgcagattacgcaatcaaaattatgaacatgatcaaaatgtac
gggaaacctatacgagtgaataaggcatctgcaaaccaacgaaatctggatgtcggggct
aatatatttatcggtaatttagatccagaagtggacgagaaacttctatatgacacattt
agtgcctttggcgtcatcttacaaactcctaagattatgagagatccagacaccggaaac
tctaaaggttacgcgttcatcaacttcgcaagttttgaggcggcagattccgctatagaa
gccatgaatggacagtttttgtgcaatagagcgattagtatatcgtacgcattccgaaaa
gattctaaaggagagaggcatggttccgccgcagaacgtatgatggcagcaaagaaccca
ctatcacttacagatagacctcatcaattatttgcagatgcccctccccctcagcaacct
ccagcccctgctggaagtgtagtcccgcctccacctcctcctgttcagcaaatggcccct
ggtcaaggcccaggtggaccagtatcatcacaacagacatcgttacctcctccagtaccc
cccccaatgggagcaccaataccgccccctgtttcaggagctccgcccatgatgcctcct
cctgttccgccttcagggatgccaccattcagtggacctcccccagggccgatgggtgca
ccgcctttcatgccaccaggaatggctcgacccccaccccctggtccacctccgagctcc
atggcaaacatgcccccacaaggcatgcctccaagaccaggtatgccaccacccccagct
cctcctatgaaccccacatctacatcacaacaaatgggaggctatccacctcagccccca
ttatcacagcagtcaaatatgggcggacctccgcctggaatgggaccgcctccaggaatg
agaccgccgcctcctggatggagaggtccgcctccacgaggacctcctccgccttttgga
atgagaggtcctccccctggaatgcgaccacccccaccaggtatgggaccaccaaggggc
cctggtatgagagggccaccgccacctaggggcatgagaccgccacccccaggaatgagg
gggccaccccctcctccacctccgtcagggggaagtaactatgataattatgaaggtgga
tactga

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