Ruditapes philippinarum (Manila clam): 132732430
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Entry
132732430 CDS
T09557
Name
(RefSeq) sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like
KO
K24469
sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132732430
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
EGF-like domain-containing proteins
hEGF domain-containing proteins
132732430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sushi
Pentaxin
EGF_TEN
EGF
EGF_DL_JAG
EGF_2
Motif
Other DBs
NCBI-GeneID:
132732430
NCBI-ProteinID:
XP_060574830
LinkDB
All DBs
Position
Unknown
AA seq
2088 aa
AA seq
DB search
MFSFKGGGQFIIGQDQDTLGGGFSSPEAFIGQITQLNMWSRSLSLRDIESLRQNCSSEMG
DVIAWADISGKAKGAVSDTPVEFCKDCPALDDISNGKVTYTGLTAGSEASYSCKKGYDLA
GRRTRLCIITGEWEGAVPVCAEIKCKIPVLSENTLVTNPTEDNKYPPGTDVFFECKEGNE
FFTEHTSVYCQDDGTFDMSIPTCDPQKCGLPPNIENGKFSNDAKLEEFPVAFTAQYKCNF
GYMFSQNSLNPSGKVNCLATGKWEANLPECVVVTCRDPIDIPYGQYQKAGNTFLDQVRYS
CDQGYDLSHTDVLECFETGEWSIAAPECIPVQCGQPDDILHGHFEGDVFTYKKTVSYKCD
LGYVLTGGDEQRQCQADTFWSGTAPACKPVSCGKPEIIENGQWKGRDYTLNNVIRYVCDA
GYELDGPEERICRETGKWQNQSPVCNKIKCPTPPSVDNGFYTGNSFFFQDTVTYSCENGF
TMEGEALLLCLGSKQWSQAPPTCNRIVCYSPPRVNNAIYSNPQALETFNIGDRVTYQCNA
GYELSINSLNPRGEIECLETGLWEANLPECFLVKCPQPLPIQYGNAVVSSVNLEFGSFVR
YICNEGYELQGEASLTCQSDSTWSGVAPTCQAIECVAPPFVLNGRLDYKDLKLGSVIRYM
CNEGHELTGLEVRRCLANLTWEGEEPVCSPVDCGVPDSIDNGIIEYENTLFQASVQYSCN
TGYILGGDRTRSCTKEKRWSGEVPSCEIVQCDKPSHIISNGRMLGEVFTYGSVISYECDP
GYYIDGLSNNRTCLASGEWNRPIPVCTAVECPRLNIRNGFTSGFQTEFGTTVAVTCRSGY
RLQGASNRTCQEDGSWSGEQTVCIKYACPRLDPPVNGQVLVRGGTATYICLEGYTMTGPN
VRECQSDDTWSLTAPTCGGVQCQDITSGGFQNGVMTFDQLTYGSSIIFECNPGYSLVGER
KLDCLYDGSWSGVMPFCDKKTCFPPFVPSNAQLVGTDFSFGATVSFQCDEGYRITGNTER
QCQADGSWSGSSPTCLFIICPRPEPNRNVIVSGTDYTYGNQLEYLCNAGYVLDGPSTRIC
TESGEWSGKEPECLRNECPRPPPLQNGRYFASSYSQGSNIIYSCNEGYELVGIGVRLCLG
THEWSGSDPYCQKVKCANPPPIDNGFFSGNEFFYEDIIEYQCNTGYEIVGQAQRKCLSNG
RWGGADATCIKITCGPPPIKLNVVYDIPGGEKEGSFEATASLSCEEGYRGIGVSSQRCQA
NGQWSESNFVCEIVTCPAFPDVRNGRAIGNGFQFGNELEIQCDEGYYLVGKARPRCGPNG
DWDYENEPPHCEISGCPDLPKITNGLTSETGSGIGLTVTYRCNDGYRLQGSDRRTCQKDG
SWSGSDPYCRLILCEVPPFIEHAIPFNALTQYLFNSKARYVCETGYELSAGDSLLTCSAS
GTWEGIIPTCSLVQCGEPTQVANSKVAVASYNFKGEAQYLCYLGYRVKGSSSIITCDENG
NWLGATPECVPIDCGPPPYVPNSLKIDSKNYTYKSVIQYICDVGFTLIGQRTTSCQATGV
WSGKTPVCEPKSCGTPPPIDNAIYIGNYHFYKSTVTYKCFPNFEISGNPTLTCSYTGAWI
GDRPECHAVTCGPPPVFPHSSTTMPMEAYVNSVVTFTCNDGFYLIGSATARCTENKQWQY
EGGETACLRLDCYDPPQMPNGGRKFVGTLFESTVDYFCDEGYILSGQSSLVCGISGQWEG
KLPICELVNCGVPPFSDHMTVTGDSFTYQSTVTYMCEKGYKAKGRLVSECTSSGRWSNQP
PQCERVTCQRLTLPENVLILNGNLGSENGYGDQIVLGCDSGYNMAGLGQLDCLETGLWSS
DPPACTPIPGALACAADTGVEHARALSDARPVGKVETLECVEGFTASGDVTIICQENSTW
SDPAGSCSRVFCGKPRLRDFVNVVRIQGASYYFGDKINFKCRSGVAPARSPPIIRCMSDG
TWDGDIKCGVTCKRPCQHGGICLGLNRCKCRSGYGGQVCERAICIHPCFNGGKCTSPYSC
TCKHGYKGTRCERAVCDKPCQNGGKCMRPNKCRCRYKYSGQFCENKKF
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttcaaaggcggcggacaattcatcattggacaggaccaagatacgctaggt
ggcgggttttccagccccgaagcgttcattggtcaaattactcagctgaacatgtggagt
agaagtctgtctctaagagatattgaatcactacgacaaaattgttcgtcagaaatgggt
gacgtcatagcctgggcggatatatccgggaaagcaaaaggcgccgtctctgatacacct
gtggagttttgtaaagactgtccggcactcgatgatatcagcaatggcaaagttacctac
accggtttgaccgcgggatcagaggcctcgtatagctgtaaaaaaggatacgatctagct
ggtcgcaggacaagactttgtattattactggagaatgggagggtgctgtgccagtatgt
gcagaaataaagtgcaaaattccggtgctgtcagaaaacacactcgtgacaaatccaaca
gaagataacaaataccctcctggcacagacgtgttttttgagtgtaaagaaggaaatgag
ttcttcactgaacacacatccgtctattgtcaagacgacggaacatttgatatgagtata
ccgacttgtgatccgcagaaatgtgggctcccgccgaatatagaaaatggaaaattttct
aatgatgcaaaactagaagagtttcccgttgcctttacggcacaatataaatgcaatttc
ggatatatgttttcgcagaacagtctgaacccatcaggtaaagttaactgcctcgccaca
gggaaatgggaagccaatcttcccgaatgcgtagttgtgacgtgccgggatccaatcgac
ataccatatggtcaatatcagaaagctggaaacactttcctagatcaggtacgctacagt
tgtgatcaagggtatgacctttcacacactgatgtcttggagtgtttcgaaactggagaa
tggagtatagcagcacctgaatgcattcctgtgcaatgcggacagcccgatgatatactg
cacgggcatttcgaaggcgacgtatttacatacaaaaaaactgttagttataaatgtgat
ctaggttatgtacttactggcggggatgagcaacgacaatgccaggcagataccttctgg
agtggcacagctcctgcgtgtaaaccggtgtcatgtggcaaaccagaaatcatagaaaat
ggacagtggaaaggcagggactatacgttaaacaacgtcattcgttatgtttgcgatgct
gggtacgaattagacggacccgaggaaagaatttgtcgcgaaactgggaagtggcaaaat
caatcgccggtttgtaataaaataaaatgtcctacaccaccttcagttgacaacgggttc
tacacgggaaactcgttctttttccaagatactgtgacatattcctgtgaaaatggcttt
actatggaaggagaagctttgcttctatgcttaggaagtaaacaatggtctcaagctcca
ccaacatgtaatcgtattgtatgttatagtccgcctagagtgaataacgcgatttattcc
aatccacaagcgcttgaaactttcaatattggcgacagggtgacatatcaatgtaatgct
ggctatgaattatctataaatagtttgaaccctcgaggagaaatcgaatgcttagagaca
ggattatgggaagcaaatttaccagaatgttttttagtaaaatgtccccagccattgcct
attcaatatggaaatgccgttgtttcgagtgtaaatcttgaattcggaagttttgtaaga
tatatttgtaatgaaggttatgagctacaaggggaggcaagtttaacttgccagtcagat
tctacctggtctggggtggcaccgacttgccaggctattgaatgtgtggcgccaccattc
gtactaaatggccggttggattacaaggacttgaaattaggttcagttattagatacatg
tgtaatgaaggacacgaattaactggccttgaggtacgtcgttgcttagcaaatttaacg
tgggaaggtgaagaacctgtgtgttcaccggttgattgtggggtaccagacagcattgat
aatggcataattgaatatgaaaacaccttatttcaagcgtctgtgcaatatagctgtaat
accggatatatccttggtggtgacagaactcgttcatgtactaaagaaaaaagatggagt
ggtgaggtcccttcttgtgaaattgttcagtgtgacaaaccatcccatattatatcgaat
ggacgtatgttaggggaagtgtttacttatggatcagttatttcatacgagtgtgacccg
ggttattacatagatggattatcaaacaacagaacgtgtcttgcttccggtgaatggaat
agaccaataccagtatgcacagccgttgaatgcccgagacttaatatccggaatgggttt
acgtcaggttttcaaaccgaatttggcaccacagttgcagtgacgtgtcgttctggttac
agacttcaaggggcatctaatcgcacgtgccaagaggatggttcgtggagtggggaacag
actgtctgcataaagtacgcctgtccgaggctcgatcctcctgtgaatggtcaggtttta
gttcgtggggggacggctacgtacatatgtctagagggatacacgatgactggaccgaac
gttcgagaatgtcagagtgatgacacatggagcttaacagcaccaacatgtggaggtgta
caatgccaagatataacatcggggggattccaaaatggtgtgatgaccttcgatcaacta
acatacggttctagtataatatttgaatgtaatccgggatattccttggttggagagcgc
aagttagattgtctctatgacggatcttggagcggcgtgatgccattttgtgacaagaaa
acgtgctttccaccgtttgttccatcaaatgctcagctagttggtacagatttttcgttc
ggggcaacagtaagtttccagtgcgacgaaggttatagaataaccggaaatacagagcga
caatgccaggctgacgggtcttggtcaggttcgtcaccaacctgtctctttatcatatgt
ccgagaccagagcctaatagaaacgttattgtaagtggcactgattacacctatggtaac
caacttgaatatctatgtaatgccggctatgttctcgatggaccaagcactagaatatgt
acggaaagtggcgaatggtccggaaaagaaccggaatgtttaagaaacgaatgtccaagg
ccgccgcctttacaaaatgggcgttactttgcatcgagttattcacaaggcagtaatata
atttactcatgtaacgaagggtacgagctcgttggcataggtgttcgtttgtgtttaggg
acacatgagtggtcagggagtgatccgtactgtcagaaagttaaatgtgctaatccaccg
cctatagataatgggttcttcagcgggaatgagttcttttatgaagacattattgaatat
caatgtaacacaggctatgaaattgtgggacaagcacaacgcaagtgcctctctaatggt
cgatggggcggagctgatgcgacttgtataaaaataacatgtggtcccccacctattaag
ctcaatgttgtatatgacataccaggcggggaaaaagaagggagtttcgaagccacagcc
tcactatcatgtgaggaaggttatcgcggtattggtgtgagttctcaacggtgccaagct
aatggtcaatggtctgaatctaattttgtctgtgaaattgtcacatgtcctgcatttccg
gatgttcggaatggcagagctataggcaatgggtttcagtttggaaatgaacttgaaatc
cagtgcgacgaagggtattatttagtaggaaaagcaagaccaaggtgcggccctaatgga
gactgggattatgaaaatgagccgccacactgtgagatatccgggtgtcctgacttaccg
aaaataacaaatggattgaccagtgagacagggtcaggaattggtttaactgtgacatac
agatgtaatgacggatatagacttcaggggtcggaccgacggacatgccagaaagatggt
tcatggagtggctcggatccctattgtagattgattttatgcgaagtaccaccatttatt
gagcatgcaattccttttaatgccctaacacaatatttatttaattctaaagcacgttac
gtttgtgaaactggatatgaattgtcggctggagacagtttattaacgtgttccgcgtct
ggtacatgggaaggtattattccaacatgctcgcttgtgcaatgtggggagccaacgcaa
gtcgcaaacagcaaagttgctgtagcctcgtacaattttaaaggcgaggctcagtatttg
tgttacctgggatacagagtgaaaggttcttcttcaataataacatgtgatgagaatgga
aactggcttggtgcgacacctgaatgtgtaccgatagattgcggtccgccaccgtatgtt
cctaactctttaaaaattgattcgaagaattacacttacaaaagtgttattcaatacatt
tgtgatgtaggattcactcttatcggtcaaaggacgacatcatgccaagctactggtgta
tggtcgggcaaaactcccgtttgtgagccaaaatcatgcgggactccgcctcctattgac
aatgctatttacatcggtaattaccatttctataaatccactgtaacatacaaatgcttc
ccaaattttgaaatctccggaaatccaacgctgacttgttcatacacaggggcatggata
ggcgatagaccggagtgtcatgctgtgacatgcggtccaccaccagtgtttcctcattct
tccacaacaatgccaatggaagcttatgtcaatagtgttgttacgttcacatgtaatgac
ggcttttacttaatcggtagtgcaacagcaaggtgtacggaaaacaagcaatggcagtat
gagggaggcgagacagcatgtttacgtctcgattgctacgatcccccacaaatgccaaac
ggcggcaggaaatttgtcggaacattgttcgaatctacagtggattatttctgtgacgaa
ggttacatattatctggacagagttctttagtttgtggtatctcagggcaatgggaagga
aagcttcctatttgcgagttagtaaattgtggtgtaccaccatttagcgaccacatgaca
gtcactggagacagtttcacatatcaaagtacagtaacatatatgtgcgagaaagggtat
aaagcaaaaggtcgccttgtctcagagtgtacatcatccgggagatggtctaaccagcca
ccacagtgtgaacgggtgacatgccaacgtcttacattaccagagaatgttttaattcta
aacggaaatcttggaagtgagaacggatatggggatcagatcgtgttaggatgtgattca
ggttacaacatggccggtctgggacaacttgactgcctagagacgggattgtggagctct
gatcctccagcgtgtacacccattccaggagcacttgcatgtgcagctgacacaggtgtt
gaacatgcacgtgcgttaagcgatgcacgaccagttggcaaagtagagacacttgaatgt
gttgagggctttactgcgtcaggggacgtaactataatttgtcaagaaaattcaacatgg
tctgaccctgctgggtcctgttcaagagtgttctgtggtaagccaagattacgcgacttt
gtgaatgtggtacgtatacagggtgcgtcatattactttggagacaagatcaacttcaaa
tgccggtccggtgtggccccggccaggtcaccgccgataatacggtgtatgagtgatggc
acctgggacggcgacatcaaatgcggagtgacatgtaagagaccatgccaacatggtggt
atttgtctgggtctgaaccggtgtaaatgtcgttctggctatggtggtcaggtttgtgaa
agagcgatttgcatacatccttgttttaatggtggtaaatgtacgtctccttattcctgc
acgtgtaaacatggatataaaggtacacgttgtgagagagctgtgtgtgataaaccgtgc
caaaatggcgggaaatgcatgcgaccaaacaaatgccgttgccgttacaaatacagcgga
cagttctgtgaaaacaagaaattttaa
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integrated database retrieval system
