| Entry |
|
|---|
| Name |
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
|
|---|
| KO |
| K12882 | nuclear cap-binding protein subunit 1 |
|
|---|
| Organism |
rphi Ruditapes philippinarum (Manila clam)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:rphi00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132732496
09122 Translation
03013 Nucleocytoplasmic transport
132732496
03015 mRNA surveillance pathway
132732496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:rphi03019]
132732496
03041 Spliceosome [BR:rphi03041]
132732496
Messenger RNA biogenesis [BR:rphi03019]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
132732496
Spliceosome [BR:rphi03041]
Common components
Common spliceosomal components
Cap binding complex
132732496
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
655 aa
MASRRRRASFSDDEDDTVHRKRRRTSENVDIEDRLESLISRVGEKSTSSLESNLEGLASV
LEADLPNYKTKIIRILCECAVKLPEKQAVYTTLVGLLNAKNYNFGGEFVEMLVRNMKEAL
KTEEFESARLIIRFIADLVNCRVIVAGSLLAMFDNFIEVTLEDNIPQVRSDWYVYAVLTS
LPWVGRELYEKKEMEFQKLLVSIDGYISKRQKIHVPALRVWSTDTPHPQEEYLDCLWAQI
KNLRNNKWIEKQVPRPYLAFDSVLCEALQHPLPQIIPPSHNEEIMYPLPTVVFRMFDYTD
VPEGPAIPGSHAIDRFLIEEEMRYLIKTHNQDRKDCAAALLSYTTKNKIPLNYMIVEVMF
GQLFRLPQPPYLEIFYGSTLIELCKLQPGSMPQVLAQATEMLYERLDTMKSPCIERFSNW
FAYHLSNFQFRWSWDDWIACTQVNPLLPKPKFVTEVLHKCLRLSYHQRIKDTVPEAFREL
IPAKPQARYKYEEEGAGSLPGTMVSHQLIDAIKSKCTPEETLVLLKELPNPLADDTDEPS
HHPLRIDVFVSTLLHLGSKSFSHSFAAIAKFHFVLKMLAESEEGQICLLKTMYEVWSTHP
QMMVVLTDKLLKTQIVECSSVANWLFSADMAPDFTRNYVWEIMHYCSVTGTMYGR |
|---|
| NT seq |
1968 nt +upstreamnt +downstreamnt
atggcatcaagaaggcgccgtgcgtcatttagtgacgatgaagatgatactgttcacagg
aaaagaaggaggacatctgaaaatgttgacattgaggacaggcttgagtcacttatttct
agagttggagagaagagtacatcatcactggagagtaatttagaaggtctagcaagtgtc
ctggaagctgatttacccaattacaaaacaaaaattatcaggattttatgtgaatgtgct
gtcaaattaccagagaagcaggctgtctacactacattggttggtctcctcaatgccaaa
aattacaattttggaggggagtttgtcgaaatgctggtgcgaaatatgaaagaagcgcta
aaaactgaagagtttgagtctgctaggcttattatccggttcatagctgaccttgtaaac
tgccgagtcatagtagctggttccctgctcgccatgtttgacaattttattgaagtgaca
ttagaagataatataccacaggtgagatcagactggtatgtgtatgccgtactgacgtca
ctaccatgggttggtagagaattgtatgagaagaaagagatggaatttcagaagttactg
gtcagtatagatggttatataagtaaaagacagaagatacatgtaccagcattaagggtg
tggtctactgatactccccacccacaagaagagtacttggattgtctgtgggcgcagatt
aagaatttgcggaacaacaaatggatcgagaagcaagtgccgcggccatatttggcgttt
gacagcgttttatgcgaggctctacaacacccgttaccccagataatccctccgtctcac
aacgaagagattatgtacccgctacctacggtcgtcttcagaatgttcgactacacagat
gttccagagggtccagctattccaggcagtcatgctatagatcgattccttattgaagaa
gagatgagatatttgatcaagacgcacaaccaagacagaaaagattgtgccgcagctttg
ctgagctacacgaccaagaacaaaattcccctgaactatatgattgtcgaggtgatgttt
ggtcaactattcagattacctcaacccccataccttgagattttctatggttcaacactg
atagagctgtgtaaactacaaccagggtccatgccacaagttttggctcaagctacagaa
atgttgtatgagagactggatacgatgaagtctccatgtattgaaaggttttccaactgg
tttgcctaccatttgagtaacttccagttcagatggagctgggatgattggattgcatgt
acacaggtcaacccgcttctccctaaacctaagtttgttacagaggttctccataaatgc
ctaagattgtcgtatcatcaaaggatcaaagacacggtaccagaagcctttagagaactg
ataccagccaaacctcaagccaggtacaagtacgaggaagaaggggcaggatcattgccg
ggtaccatggtttcccatcagttgatagatgccatcaaatcaaaatgtacaccagaagag
acgctggtcttattgaaagaattaccaaatcccctagctgatgatacagatgagccgtca
caccaccctctcagaatagatgtgtttgtgtctacactgttacatcttggatctaaatct
ttctcccattcatttgctgccattgcaaagtttcattttgtattgaagatgttggccgag
tctgaggaaggccagatatgtctcctgaagacaatgtatgaagtctggagtacacatcca
caaatgatggtagttctgacagacaagcttctgaagacacagatcgtagagtgctcatct
gttgctaactggctcttctcagccgacatggcaccagatttcaccaggaactatgtatgg
gagataatgcactattgttctgttacaggaactatgtatgggagataa |
|---|
