KEGG   Ruditapes philippinarum (Manila clam): 132732768
Entry
132732768         CDS       T09557                                 
Name
(RefSeq) pumilio homolog 3-like
  KO
K14844  pumilio homology domain family member 6
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132732768
   03009 Ribosome biogenesis [BR:rphi03009]
    132732768
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     132732768
Ribosome biogenesis [BR:rphi03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    132732768
SSDB
Motif
Pfam: CPL PUF_NOP9 PUF DUF848 CM1 DUF2951
Other DBs
NCBI-GeneID: 132732768
NCBI-ProteinID: XP_060575249
LinkDB
Position
Unknown
AA seq 785 aa
MEVSRRQQRRSNFSHQAARGNPEGDSIIKKQRYKVGGPQADYDTTADYGMSPVKRRKQHG
YENYHSTNKKGHYGQSYLESEVSTLDITDTPDSLSQISAIAPVSDISNIQPSFARSRHSK
MAADTTWENAVSHARGEPDGAEKSFHKKKSKVSIKEQLETVPEEDSVHSKGSSGGGSMRQ
VEGSPGIQKPPPTAVERKKSVKGQLRKAASVLKKARSKSKLPENKVGVKRKLDATLADET
MTTKPDTKELSKKERKHVRKALKTNFEQIQRSKKIWEELRRFNVKKDRKLELCNELYDMV
KDKMKEFCFAHDTARVIQCLIQYGTPEHRERVFEELKEEIPTMSKSKYAKFLVKKMLMYG
TKHHRSAVYKSFHGHVRQLIRHKVAADVVEYAYNEYANAHQRLSMLEDFYGPSFCLFKTP
DIKCLGQIMLSQPDKRDMILRNMREALLPLIDKNILVHSMVHKVFMEYFTYADGKMKAEM
IEALRESVIHMLHTRDGARVAMQCIWHGTAKDRKTIIKSFKGNVVKICQEEYGHLVMLSI
FDCVDDTKIVKAALLEEMMKSLNDIAQNQYGRKVLLYLLSPRDSHHFCPDIVRVLQEGDA
SLTSKKEKSVRYQELLGAVSDQLLQYIVDNVATLVVNNNMLVLIVAIITHAQGDPTAAME
AVASIAAEPFVVGNTEGGLHIVENPAGHMTLKWLIQNDKQRIKTGQKVLFSEVLLKKLPE
GALKSWAACNRGCFILVCLLDLEHSEITKLVVGQLMKGVRHSLKKMTFKGAQILAQKLDE
AKTAV
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggaagtttctagaaggcagcagaggagaagcaattttagtcaccaggcagccaggggc
aatccagagggagacagtataatcaagaaacagagatataaagtaggaggccctcaggca
gattatgacactacagctgattatgggatgtcacctgtgaaaagaagaaagcagcatgga
tatgaaaattatcactcaacaaacaagaaaggtcattatggacagagttacttggagtca
gaggtttccaccttagacattacagataccccagattcactgtcacagatcagtgctata
gcgccagtctctgacatttcaaacatccagcccagttttgcaaggtctcgtcacagcaag
atggccgctgacacaacatgggaaaatgcagtatcacatgctagaggggaacctgatggt
gctgaaaagtcatttcataaaaagaagagcaaggtgtcaattaaggaacagttagaaact
gtaccagaagaggactctgtacacagtaaaggtagtagtggaggggggagtatgagacaa
gttgaaggatcaccaggaatacagaaaccaccacccactgctgttgaaagaaagaagtct
gtcaagggtcagttaaggaaagcagcatctgttctgaaaaaggccagatctaaatctaaa
cttccagaaaacaaagttggtgtgaaaagaaaacttgatgccacattggcagatgaaaca
atgacaacgaagccagacactaaagaattaagtaagaaagagaggaaacatgtgaggaaa
gctttaaagaccaactttgaacagatacagaggtccaagaaaatctgggaagaattaaga
aggtttaatgtgaaaaaagataggaagctggagttgtgtaatgaactgtatgatatggtt
aaagataaaatgaaggagttttgttttgcacacgatacagctagagttatacagtgttta
atacagtatggaacaccagaacacagggaaagagtttttgaagaattaaaagaggaaatt
cctacaatgtcgaagtcaaaatatgcaaaattcttggtgaagaaaatgcttatgtatgga
acaaagcatcacagaagtgcagtgtacaaaagtttccatggtcatgtaagacagctaata
agacataaggtggctgctgatgtggtggagtacgcctacaatgaatatgccaatgctcat
cagagactcagtatgctagaggacttctatgggccaagtttttgtcttttcaagacacca
gatataaaatgtttaggacagattatgttgagtcaaccagacaagagagacatgatcttg
cggaatatgagagaggcacttttacccctgatagataaaaatattttggttcattcaatg
gtacataaagtatttatggagtatttcacatatgctgatggaaaaatgaaagcagaaatg
atagaagcattaagagagtcagtaatacatatgttacatacgcgagacggtgctagggta
gctatgcagtgtatctggcatggaacagcaaaggacaggaaaactataataaagagtttt
aaaggaaatgttgtgaagatttgtcaagaggagtatgggcatcttgtgatgttgtcaata
tttgactgtgttgatgatacaaaaattgtaaaagctgcattacttgaggaaatgatgaaa
agtttaaatgatatagcacagaaccagtatggtagaaaggtgttactgtatttattaagt
ccgagagattctcaccatttctgtccagacattgtacgagtgctgcaggaaggggatgct
agccttaccagtaagaaggagaagtcggtgagatatcaagagttactgggagccgtgtca
gatcagttactacagtatattgttgacaatgtagccaccctggttgtgaacaataatatg
ctagtgttgattgtagccattataacacatgctcaaggagatcctacggctgctatggag
gctgtggcgagtatagccgctgaaccgtttgttgttggtaatacagagggcggtctacac
attgttgaaaaccccgcaggtcacatgaccctgaaatggctcatacagaatgataaacag
agaattaaaaccggacagaaagttttgttctcagaagtgttactaaagaaactacctgaa
ggagctctcaaatcatgggcagcctgtaatagaggatgctttatcctagtgtgtttattg
gacctggagcactcagagattacaaagttagttgtaggccagctgatgaagggtgtacgg
cattcactgaagaaaatgacatttaagggagcacaaatattggctcagaaacttgatgag
gcaaaaacagcagtatag

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