Ruditapes philippinarum (Manila clam): 132732768
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Entry
132732768 CDS
T09557
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132732768
03009 Ribosome biogenesis [BR:
rphi03009
]
132732768
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
132732768
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
132732768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
DUF848
CM1
DUF2951
Motif
Other DBs
NCBI-GeneID:
132732768
NCBI-ProteinID:
XP_060575249
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MEVSRRQQRRSNFSHQAARGNPEGDSIIKKQRYKVGGPQADYDTTADYGMSPVKRRKQHG
YENYHSTNKKGHYGQSYLESEVSTLDITDTPDSLSQISAIAPVSDISNIQPSFARSRHSK
MAADTTWENAVSHARGEPDGAEKSFHKKKSKVSIKEQLETVPEEDSVHSKGSSGGGSMRQ
VEGSPGIQKPPPTAVERKKSVKGQLRKAASVLKKARSKSKLPENKVGVKRKLDATLADET
MTTKPDTKELSKKERKHVRKALKTNFEQIQRSKKIWEELRRFNVKKDRKLELCNELYDMV
KDKMKEFCFAHDTARVIQCLIQYGTPEHRERVFEELKEEIPTMSKSKYAKFLVKKMLMYG
TKHHRSAVYKSFHGHVRQLIRHKVAADVVEYAYNEYANAHQRLSMLEDFYGPSFCLFKTP
DIKCLGQIMLSQPDKRDMILRNMREALLPLIDKNILVHSMVHKVFMEYFTYADGKMKAEM
IEALRESVIHMLHTRDGARVAMQCIWHGTAKDRKTIIKSFKGNVVKICQEEYGHLVMLSI
FDCVDDTKIVKAALLEEMMKSLNDIAQNQYGRKVLLYLLSPRDSHHFCPDIVRVLQEGDA
SLTSKKEKSVRYQELLGAVSDQLLQYIVDNVATLVVNNNMLVLIVAIITHAQGDPTAAME
AVASIAAEPFVVGNTEGGLHIVENPAGHMTLKWLIQNDKQRIKTGQKVLFSEVLLKKLPE
GALKSWAACNRGCFILVCLLDLEHSEITKLVVGQLMKGVRHSLKKMTFKGAQILAQKLDE
AKTAV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttctagaaggcagcagaggagaagcaattttagtcaccaggcagccaggggc
aatccagagggagacagtataatcaagaaacagagatataaagtaggaggccctcaggca
gattatgacactacagctgattatgggatgtcacctgtgaaaagaagaaagcagcatgga
tatgaaaattatcactcaacaaacaagaaaggtcattatggacagagttacttggagtca
gaggtttccaccttagacattacagataccccagattcactgtcacagatcagtgctata
gcgccagtctctgacatttcaaacatccagcccagttttgcaaggtctcgtcacagcaag
atggccgctgacacaacatgggaaaatgcagtatcacatgctagaggggaacctgatggt
gctgaaaagtcatttcataaaaagaagagcaaggtgtcaattaaggaacagttagaaact
gtaccagaagaggactctgtacacagtaaaggtagtagtggaggggggagtatgagacaa
gttgaaggatcaccaggaatacagaaaccaccacccactgctgttgaaagaaagaagtct
gtcaagggtcagttaaggaaagcagcatctgttctgaaaaaggccagatctaaatctaaa
cttccagaaaacaaagttggtgtgaaaagaaaacttgatgccacattggcagatgaaaca
atgacaacgaagccagacactaaagaattaagtaagaaagagaggaaacatgtgaggaaa
gctttaaagaccaactttgaacagatacagaggtccaagaaaatctgggaagaattaaga
aggtttaatgtgaaaaaagataggaagctggagttgtgtaatgaactgtatgatatggtt
aaagataaaatgaaggagttttgttttgcacacgatacagctagagttatacagtgttta
atacagtatggaacaccagaacacagggaaagagtttttgaagaattaaaagaggaaatt
cctacaatgtcgaagtcaaaatatgcaaaattcttggtgaagaaaatgcttatgtatgga
acaaagcatcacagaagtgcagtgtacaaaagtttccatggtcatgtaagacagctaata
agacataaggtggctgctgatgtggtggagtacgcctacaatgaatatgccaatgctcat
cagagactcagtatgctagaggacttctatgggccaagtttttgtcttttcaagacacca
gatataaaatgtttaggacagattatgttgagtcaaccagacaagagagacatgatcttg
cggaatatgagagaggcacttttacccctgatagataaaaatattttggttcattcaatg
gtacataaagtatttatggagtatttcacatatgctgatggaaaaatgaaagcagaaatg
atagaagcattaagagagtcagtaatacatatgttacatacgcgagacggtgctagggta
gctatgcagtgtatctggcatggaacagcaaaggacaggaaaactataataaagagtttt
aaaggaaatgttgtgaagatttgtcaagaggagtatgggcatcttgtgatgttgtcaata
tttgactgtgttgatgatacaaaaattgtaaaagctgcattacttgaggaaatgatgaaa
agtttaaatgatatagcacagaaccagtatggtagaaaggtgttactgtatttattaagt
ccgagagattctcaccatttctgtccagacattgtacgagtgctgcaggaaggggatgct
agccttaccagtaagaaggagaagtcggtgagatatcaagagttactgggagccgtgtca
gatcagttactacagtatattgttgacaatgtagccaccctggttgtgaacaataatatg
ctagtgttgattgtagccattataacacatgctcaaggagatcctacggctgctatggag
gctgtggcgagtatagccgctgaaccgtttgttgttggtaatacagagggcggtctacac
attgttgaaaaccccgcaggtcacatgaccctgaaatggctcatacagaatgataaacag
agaattaaaaccggacagaaagttttgttctcagaagtgttactaaagaaactacctgaa
ggagctctcaaatcatgggcagcctgtaatagaggatgctttatcctagtgtgtttattg
gacctggagcactcagagattacaaagttagttgtaggccagctgatgaagggtgtacgg
cattcactgaagaaaatgacatttaagggagcacaaatattggctcagaaacttgatgag
gcaaaaacagcagtatag
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