Ruditapes philippinarum (Manila clam): 132732815
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Entry
132732815 CDS
T09557
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132732815
03036 Chromosome and associated proteins [BR:
rphi03036
]
132732815
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132732815
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
132732815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
132732815
NCBI-ProteinID:
XP_060575306
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MASNDIQIEYFKNPEEPTTGTKPKVYKDGQYNDPLYKKLSKINGEINKLTKVELQGKLKE
HGLDSRGLKEVLKKRLKNHYRRRNLRKSKMKTSGKTLYDYLAVIDFEATCDENNPSYRHE
IIEFPIVLVDVDKMEIVSKFHEYVKPIVNPKLTKFCTKLTGITQDKVDKADTFPVVLERV
ETWLQDHQLGAEKSFAVLTDGPWDMFRFMYYQCKESDIEMPAWSKKWVNIRKSYCNFYHC
GRGGIEVMLKNLGMKFEGSPHSGIDDSINISRIAIKMLNDGCGLNVNEHIQIKYHPHETG
TVSARYEPYKEECVNDSEEEEEDQKKKKSEKTQDKWENESHDTFVNEIEKLTLNDVEKGD
DDEDFDDLLTYYKLQKT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatgatatacaaatagagtacttcaaaaatccagaggaaccaacaactgga
accaagccaaaggtatataaagatggacagtacaatgacccattgtataagaaattgtca
aaaataaatggagaaattaacaaactgacaaaagtggaactacaaggaaaacttaaagaa
catggtcttgactcaaggggtctgaaggaggttttaaagaagaggttgaagaatcattat
aggagacgcaaccttcggaaatctaaaatgaagacgtcaggaaagactctatatgattat
ctagctgtgattgactttgaggcgacatgcgatgagaacaaccctagctacagacatgag
attatagaatttcctatagttcttgttgatgtggataaaatggaaattgtttcaaaattc
catgaatatgtgaagccaattgtaaaccctaaactgactaagttttgtaccaagctcact
ggcattactcaggacaaagtagacaaagcggacacatttccagtggtattagaaagggta
gagacctggttacaggatcatcaacttggtgccgaaaagtcatttgcagttctaacagat
ggtccatgggatatgtttagattcatgtattatcaatgtaaagagagtgacatagaaatg
cctgcttggtcaaagaaatgggttaacatcaggaaatcatactgtaacttttaccactgt
ggtaggggaggtatagaagtaatgctgaaaaatttaggaatgaaatttgaaggatcacca
catagtgggatagatgactcaatcaatatttctcgaattgccataaaaatgttaaacgac
ggctgcggcctgaacgtaaatgaacatattcaaataaagtaccatccacatgagactggc
acagtgagtgccaggtacgagccttacaaagaagaatgtgttaacgattctgaggaggaa
gaagaagatcagaaaaagaaaaaatcggaaaaaacgcaggacaaatgggaaaacgagtct
catgacacttttgttaatgaaattgagaagttgactttaaatgatgtagaaaagggtgat
gatgatgaagattttgatgatttattaacatattacaagttacagaaaacatga
DBGET
integrated database retrieval system