KEGG   Ruditapes philippinarum (Manila clam): 132732815
Entry
132732815         CDS       T09557                                 
Name
(RefSeq) 3'-5' exoribonuclease 1-like
  KO
K18416  3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132732815
   03036 Chromosome and associated proteins [BR:rphi03036]
    132732815
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     132732815
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    Other RNAi proteins
     132732815
SSDB
Motif
Pfam: RNase_T SAP SAP_new25
Other DBs
NCBI-GeneID: 132732815
NCBI-ProteinID: XP_060575306
LinkDB
Position
Unknown
AA seq 377 aa
MASNDIQIEYFKNPEEPTTGTKPKVYKDGQYNDPLYKKLSKINGEINKLTKVELQGKLKE
HGLDSRGLKEVLKKRLKNHYRRRNLRKSKMKTSGKTLYDYLAVIDFEATCDENNPSYRHE
IIEFPIVLVDVDKMEIVSKFHEYVKPIVNPKLTKFCTKLTGITQDKVDKADTFPVVLERV
ETWLQDHQLGAEKSFAVLTDGPWDMFRFMYYQCKESDIEMPAWSKKWVNIRKSYCNFYHC
GRGGIEVMLKNLGMKFEGSPHSGIDDSINISRIAIKMLNDGCGLNVNEHIQIKYHPHETG
TVSARYEPYKEECVNDSEEEEEDQKKKKSEKTQDKWENESHDTFVNEIEKLTLNDVEKGD
DDEDFDDLLTYYKLQKT
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcttcaaatgatatacaaatagagtacttcaaaaatccagaggaaccaacaactgga
accaagccaaaggtatataaagatggacagtacaatgacccattgtataagaaattgtca
aaaataaatggagaaattaacaaactgacaaaagtggaactacaaggaaaacttaaagaa
catggtcttgactcaaggggtctgaaggaggttttaaagaagaggttgaagaatcattat
aggagacgcaaccttcggaaatctaaaatgaagacgtcaggaaagactctatatgattat
ctagctgtgattgactttgaggcgacatgcgatgagaacaaccctagctacagacatgag
attatagaatttcctatagttcttgttgatgtggataaaatggaaattgtttcaaaattc
catgaatatgtgaagccaattgtaaaccctaaactgactaagttttgtaccaagctcact
ggcattactcaggacaaagtagacaaagcggacacatttccagtggtattagaaagggta
gagacctggttacaggatcatcaacttggtgccgaaaagtcatttgcagttctaacagat
ggtccatgggatatgtttagattcatgtattatcaatgtaaagagagtgacatagaaatg
cctgcttggtcaaagaaatgggttaacatcaggaaatcatactgtaacttttaccactgt
ggtaggggaggtatagaagtaatgctgaaaaatttaggaatgaaatttgaaggatcacca
catagtgggatagatgactcaatcaatatttctcgaattgccataaaaatgttaaacgac
ggctgcggcctgaacgtaaatgaacatattcaaataaagtaccatccacatgagactggc
acagtgagtgccaggtacgagccttacaaagaagaatgtgttaacgattctgaggaggaa
gaagaagatcagaaaaagaaaaaatcggaaaaaacgcaggacaaatgggaaaacgagtct
catgacacttttgttaatgaaattgagaagttgactttaaatgatgtagaaaagggtgat
gatgatgaagattttgatgatttattaacatattacaagttacagaaaacatga

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