KEGG   Ruditapes philippinarum (Manila clam): 132732841
Entry
132732841         CDS       T09557                                 
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4-like
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    132732841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132732841
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     132732841
SSDB
Motif
Pfam: VIT PARP VWA_3 VWA VIT_2 BRCT_2 VWA_2 BRCT TelA PTCB-BRCT Herpes_capsid
Other DBs
NCBI-GeneID: 132732841
NCBI-ProteinID: XP_060575380
LinkDB
Position
Unknown
AA seq 1481 aa
MKVFTNCTVVLEFEACTSYKEKCTWRKTITDNGGVISYILTKKASFFVVFNKKGTSISYK
LRQCNRHNIPVVSPKYVQQCVTKNRLLDTGKYRLADINNNQEFGKGKIQTTHNEVGRGTR
LVKKKVVTVNLSSYPSFLYGDVNAPEFDEDTFQLPKWALLINKETKKMEALEVHVATRLD
CQFRYRLYAQNAQVDNNKVVKIDEAIVWYFQTVSEVLSGYEQLYRQYANKPVCMVPCKPG
SVDVQDFGSATLRMKIGKLSLLNEEISPQVAALTSIVWNEALTEIIEAKVILSQLTDKLL
GNYDDDMDKLIEEFYEVLPHKEQFKKSSDWTLREVIGKQDLCQLLSDIVAVSKATDWSPD
TTVIAKYRAMGCHIKYVNQSDADSAEIYKILEEKLAKDRGKIHGLYRVRRTVEEVNFMSD
VGNINLLSHASPCHNMLGILSRGLLMPNMVADKMGVARTDVGNLGAGIYFSDNPGKSSQY
STANSQTGTRFMLLCNVSLGHCCKMYQTDFTITSAPEGFDCVQGVKSSNDNQSSFEDNEF
VIYNPSQQCVKYLVEFSLPGDNITEHPTIRDGDLQVLKGLEVTNQDTQPQTSSNTDIDIS
DIKDVQDPLAKVKAGLQGNKKEHIPLKSVHIRGKMMDMVAKVVVLQAYRNDSTTAIEAKY
VFPLDDTAAVCGFEAFINGKHVIGEVKEKSKARKEYKEAVARGDGAYLMEEETPDVFSVS
VGNLPPKCDVLIKITYISELQVQGEAIAFTIPASVAPWLRDGALSQKTQATTESVKVSDN
KRCDISLMVAIEMPFDIRRIFSPSHRVKWKKTATKAVVSLPRRSRFDEGFQLYIYLAEIH
VPRMWVEKHPTENTQACMLTFYPEFETQSVTEANIIILLDMSNSMKGQPEEQAKKVALLA
IDNLPLQCKFNLVVFGSTYKELFPSPQSCNNFSSQLAKQFIQVASANLGSTELLEPLHAT
QILSSATVSSADQSCLNLFLISDGHVTQESSILLAAQKTSQQIRIFSLGVSSTVNHHLLR
SISSVSGGTYQHFNPDTKSQWKGKLLSQLEKACQLSLTNVHVDWMQTNDKATPPTQAPIH
IPCLFSGCRQVVYGFVESCTQATLKAKVGNNEISTMVSTVDLNITTGTMLHQLTARAVIT
DYENGTLDDDRIKHQVIKNERKQYIIDLSKKHSIVTPYTSFVAIEDRHQDEHDVSIIPSI
ADLIEKETVDILPYISWKPGVEDKDEDPIAIVKDIIKRGEIQESCSMVQAEDIYNSLSEY
VDDIKADVETLEMVYDKLGTFYKQNQAETIGKILAEMEDSTIACQLKRLNDLSENDYEAY
TKYRSELRDSLCDKRYLKNVPDWLFEDELRNGKETISMEQNGEEQNNMEFQDVFGDMEMP
CLMPPEINISNEDLAKFQQMLSNASNIPLPSDDDSLQDCTVGTKDANGKNVTRGKKFASG
KAIFTDRMSTKGSSSSESGDSDSSDSNSDTSNSTTEKSDTP
NT seq 4443 nt   +upstreamnt  +downstreamnt
atgaaagtgttcactaattgtacagttgtattggagtttgaggcatgtacatcatacaag
gagaagtgtacatggagaaagacaataacagataatggaggtgtaatatcatacatcctc
accaagaaggcttcattttttgttgttttcaacaagaaaggcacaagtatttcatacaag
ttacggcagtgtaacaggcataatattcctgtggtgagcccaaaatatgtacaacaatgt
gttactaaaaatagactccttgatactggcaaatacaggttagcggacatcaacaataat
caggagtttgggaaaggaaaaattcagacaacacataatgaagtaggtagaggtacaagg
cttgttaagaagaaggttgtcacagtaaacttgtccagttatcctagcttcttatacggt
gatgtaaatgctcccgagtttgatgaggacactttccagttaccaaaatgggcgcttcta
ataaataaggagacaaagaaaatggaagcattggaggtacatgttgccaccagactggac
tgccagttcaggtacaggttatatgcacagaatgctcaagttgacaataataaggtggtg
aaaatagacgaggcaatagtctggtactttcagacggtgtcggaggtactgagtggttat
gagcagttgtatagacaatatgccaacaaacctgtgtgtatggttccttgtaaaccagga
tcagtagatgtgcaagactttggatctgctactttaagaatgaaaataggaaagttatct
ctcttgaatgaagaaatttccccccaggtggcagcactcacttcaatagtctggaatgag
gccctgacagagataattgaagcgaaagtgatactgtctcaattaacggataagttacta
ggcaactatgatgatgatatggacaagcttatagaagaattttatgaggttttgcctcat
aaagaacaatttaagaagtcaagtgattggactttaagagaagtcattggtaaacaggac
ctttgtcagcttttatcagatattgttgctgtaagtaaagccacagactggtcccctgat
actacagttattgctaaatacagagccatgggatgtcatataaaatatgtaaaccagtct
gatgctgactcagcagaaatttacaagatcttggaagagaagctagctaaagatagagga
aagatacatggtttatacagagtcaggcggactgtggaagaggtgaactttatgtcggat
gtgggaaatataaatctgctgagtcatgcttcaccctgtcacaacatgcttggaattttg
tcaaggggtttattaatgcccaatatggtagcagacaaaatgggtgttgcaagaacagat
gttggaaaccttggtgctgggatatacttctcagataatcctggaaaaagctcccagtac
tctacagcaaattcccagactggtactaggtttatgttgctgtgtaacgtatctctagga
cactgttgtaaaatgtaccagactgacttcactattacatcagcccctgaaggttttgac
tgtgtacaaggtgtgaaatcatcaaatgacaaccagagctcatttgaggataatgaattt
gttatatacaacccaagtcaacagtgtgtgaaatacctggttgagttttctctaccggga
gacaatattacagaacacccaactataagagatggagatctacaggtactgaaaggttta
gaggtcacaaatcaggacactcaacctcagacttcttcaaatactgatattgatatctca
gatattaaagatgttcaagatcctcttgccaaggttaaagcaggattacaaggtaacaag
aaggaacatatccctcttaaaagtgtacatatcagaggaaaaatgatggacatggtggcc
aaggttgtggttctacaagcatacagaaatgacagtacaactgctatagaggccaagtat
gtgttcccattggatgatacagcagcagtatgtggatttgaggctttcattaacggaaaa
catgtgataggtgaagttaaagagaagagtaaagctaggaaggaatataaagaagctgtt
gccaggggtgatggggcatacctaatggaagaagagacacctgatgtattctcagtcagt
gttggtaatttacctcctaaatgtgacgtcctcatcaagatcacatacatctcagagctg
caggtccaaggggaggcaattgcattcactattccagcttcagtagctccatggttacga
gatggagctctgtcacagaagacacaggcaacaactgaatctgttaaagtgtctgacaac
aagagatgtgacatttctctaatggttgccatagagatgccatttgacattaggagaata
ttttcaccatcccacagggtcaagtggaagaaaacagcaacaaaagcagttgtctccctt
cccagaaggagcagatttgatgaaggtttccagctgtatatatacctggctgaaatccat
gttcctagaatgtgggtggagaaacatcctacagaaaatactcaggcatgtatgctgaca
ttctaccctgaatttgagacacagtctgtgactgaggctaacattattattctgttagac
atgtctaattcaatgaaaggccaacctgaggaacaggccaagaaggtggccctgttagct
atagacaatttaccgctgcagtgcaaattcaacttggttgtgtttggtagtacatataaa
gaattgtttccatctcctcaatcatgtaacaacttctcctctcagttggcgaaacagttc
atccaggtagcgtctgcaaatttaggttccacagaattgttagagcctcttcatgctaca
cagatattgtcgtctgctacagtgtcgtctgctgatcaaagctgcctgaatctctttctc
atctctgatggtcatgtgactcaggaatcttcaattctattggctgctcagaaaacttct
cagcaaatcagaattttttcacttggagtcagctcgacagtaaatcatcatttgttgcgg
agtatttcatctgtaagtggcggtacatatcaacattttaatcctgatactaaatctcag
tggaaagggaaactactctcacagcttgaaaaggcatgccaactaagtttaactaacgtg
catgttgattggatgcagaccaatgacaaagctacacctccaacacaagcaccaattcat
atcccttgtttatttagtggttgtcggcaagttgtgtatggatttgtagagagctgcact
caagcaacactaaaggccaaggttggtaataatgaaatatctacaatggtgtcaactgtg
gatctcaatataacaactggaacaatgttacatcagttaacagctagggcagtgattaca
gactatgagaatggaaccctggacgatgacaggatcaaacatcaggtgatcaaaaatgag
aggaaacagtacatcattgacttgagtaagaaacacagtatagtgactccatacaccagc
tttgtggcaatagaggacaggcatcaggatgaacatgatgtttccataattccttccata
gctgatctcattgagaaggaaacagtggacattttaccatacataagctggaaaccaggt
gttgaagataaagatgaggacccaatagctatagtgaaagatattattaagagaggtgag
attcaggaaagttgctctatggttcaggcagaggacatatacaatagtttgtctgagtat
gttgacgatataaaagcggatgttgaaactctagaaatggtatatgacaagctgggaaca
ttctataaacagaatcaagctgaaacaattggaaaaattcttgccgaaatggaagacagc
acaattgcttgtcagttaaagagactaaatgatctgtcagagaatgattatgaggcctat
actaaatacagatcagaactaagggactctttatgtgataaaagatacctcaagaatgtg
cctgattggttgtttgaagacgaattaagaaatggaaaagaaacaatcagtatggagcaa
aatggtgaagaacaaaataacatggaattccaagatgtgtttggagatatggaaatgcct
tgccttatgcctccagaaataaatataagcaatgaagatttagcaaagtttcaacagatg
ttatcaaatgcgtcaaatattcccttgccttcagatgatgattcattgcaggactgtaca
gtaggtactaaagacgcaaacggtaagaatgtaacccgaggaaagaaatttgcatcagga
aaagcaatttttactgatcgtatgtcaacaaaaggcagcagcagttctgaatctggtgac
tctgattctagtgactctaatagtgatactagcaattctacaactgaaaagtctgataca
ccc

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