Ruditapes philippinarum (Manila clam): 132733114
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Entry
132733114 CDS
T09557
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
rphi01100
Metabolic pathways
Module
rphi_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
132733114
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132733114
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
132733114
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
132733114
Glycosyltransferases [BR:
rphi01003
]
Glycan extension
O-Glycan
132733114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
APG6_N
RasGAP_C
DUF724
DUF7560
FPP
DUF3450
GAS
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
132733114
NCBI-ProteinID:
XP_060575698
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MMDGYAPSRRRHICVMLTRSRMAQLILCLLLVLIMTPLVAHYYISNMSGQSIEGHRSRLP
SAHSDEEGFNGVQCNDLKNQVTELRRIRASVNNELRELESKRQGLQVEITKHKTQLESLR
MQQENMAKEIQQSKLNLDQLKVEEHEFANRFQPLLKAPEQILLDEANKDITKEPPSSPHN
CRMHSCFDYSRCPLFSGFPVYVYGFTNHFKDENLNEFIKSAVYYSFDKSSYVVNTPATAC
IFVVLLGETFSQVSGETLQNKLQSLSQWNGDGRNHVLLNLARTSTNFDLFNGVNTGRAII
VQSSFVESIYRLNYDIITPPTLGNSDGPVWSELPPLNPIRRQYVLSFVGQFSDISNIEGA
DLSHNTRSDLNNDQNFKSRNLQADVDIPHSSNPKSIASKLIDIELMIVGHLKKVESESKD
SVYFNFMCDKGAKTGLNGEWALCGTEAERSDYLLKSTFNIIISPANFSLVSTTVFQMRLY
ESLKYGAIPVILGDYTHLPYEELLDWRKVAIILPKSRISEMYFMLSTYTDTDVMDFKWNG
RMFWETYFATTTSIISSMLAVIRTRLLIPAKPVREEPSPNSVTNFIPVAQHLGVDPEDET
DEVLGPVEPPFPSMTYKQNFTHSTLRKVFNKPGDPFHLFPFTPFENILPSDSKFRGSGYG
YRPINQGEGGSGNEFSTAIGGNHPREQFTMVMLTYERSDVLIKAVTRLKGLPYLNKVIVV
WNNPAVPSENLGWPDIGVPIVVVKMSKNSLNNRFLPFEAIETEAVLSIDDDSHLRHDEIV
FGFRVWREERDRIVGFPGRYHAWDVKHNAWLYNSNYTCEMSMVLTGAAFFHKYYAYLYSY
TMPQAVRDKVDEYMNCEDIAMNFLVSHITRKPPVKVTSRWTFRCPGCPQQLALDESHFEE
RHKCINFLVEIYGYMPLLYTQFRVDSILFKTRISHDKQKCFKFI
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggttacgcaccctcaaggagacgtcacatatgcgtcatgctgacacgaagt
cgaatggctcagctgattttatgtctcctccttgtattaattatgacgccgctggttgct
cattattacatctccaatatgagcggtcagagcatcgaaggtcacagatcaaggctaccg
tctgctcatagtgatgaagagggtttcaatggtgtacaatgtaacgatctcaaaaatcag
gtcaccgaactccggcgtattcgtgcgtctgtcaataacgagttgcgagaactagagagt
aaacgccaaggtcttcaggtggagataactaaacataaaacacagctagagtcccttaga
atgcaacaagaaaacatggcaaaagaaatccaacagtccaagttgaatctggaccagctt
aaagtagaagaacatgaattcgcaaatcgatttcagcctcttctaaaagctccggaacag
attctattagacgaggcaaataaagatatcaccaaagagccaccgtcatctcctcacaat
tgtagaatgcattcttgttttgattattcaagatgtccacttttttcagggtttcccgtg
tatgtttatggatttactaatcattttaaagatgaaaatttgaatgaatttatcaagtcg
gcagtttattattcatttgataaaagctcatatgttgtgaataccccagcaactgcttgt
atatttgttgtgttattaggggaaacattttcacaagttagtggcgagactttacaaaat
aagctacaaagtttgtcacaatggaatggtgatggaaggaatcatgttttacttaattta
gctagaacttctacaaattttgatttatttaatggtgttaatactggcagagccataatc
gtgcaatcatcctttgttgagtctatttatagattaaattatgatattattactccaccc
actttgggtaactctgacggaccagtttggtctgaattgcctcccttgaatcctataagg
aggcagtatgttctgtcgtttgtgggacagtttagtgatatttcaaacattgagggagca
gatttgtcacacaatactagatctgatttaaataacgaccagaacttcaaatcaagaaat
ttacaagctgatgtagatatacctcactccagtaacccaaaaagcattgccagtaaattg
attgatatagaactgatgattgtgggtcatttaaaaaaagtagaaagtgagtcaaaagat
agtgtttattttaatttcatgtgcgataaaggtgccaagactggattaaatggtgaatgg
gcattatgtggaacagaggcagaaagatcagattatctactgaaatctacttttaatata
attatctcccctgcaaattttagtcttgtatctacaacagtgtttcagatgagattgtat
gaatctctaaaatatggagcgattccagtgatactgggtgattatacacatcttccttat
gaagaacttcttgactggagaaaagtggcgataattttaccaaagtcacgaatttcagaa
atgtatttcatgttaagtacttacactgacacagatgtaatggattttaaatggaatgga
cgaatgttctgggagacatattttgcgacaacaacatctattatttcatcgatgttggct
gtgatacgtactcgattgctaattccagcaaaaccggtgagagaagaaccttctccaaac
tcagtgacaaatttcattccagttgctcaacatttaggtgtggacccagaagatgaaaca
gacgaggttttagggccggttgaaccgccattcccttcaatgacctacaaacaaaacttt
actcattcaactctacgtaaagtgttcaataagccgggtgatccatttcatttgtttcca
tttacaccatttgaaaatatcttgccttctgattccaaatttagaggatcagggtatggt
tatcgaccaatcaatcaaggggaaggcgggtcaggtaatgaattttcaacagccattggt
ggaaatcatcccagggaacagttcacaatggtaatgctgacctatgaacgctctgatgtt
ttgattaaagcagtaaccagactaaaaggattaccataccttaacaaagttattgttgtg
tggaacaatcctgctgtaccctcagagaaccttggctggccagatattggggtgcccatt
gttgttgtaaaaatgagcaagaatagtttaaacaacaggttcctgccatttgaggcaatt
gaaacagaggctgtattaagtatagatgatgactcccacctgcgacatgatgaaatcgtg
tttggttttagggtatggagagaggaaagagacagaattgtagggtttccaggacgatat
cacgcctgggacgtgaaacacaatgcctggttatataactcaaactatacatgtgagatg
tccatggttcttactggtgcagccttctttcataagtattatgcctacctctatagctac
acgatgcctcaagcagttcgagataaagtagacgagtacatgaactgtgaggatatcgcg
atgaactttctcgtatcccatatcacgaggaaacctccagtcaaggtaacctctagatgg
acattccgctgccctggttgcccacagcaacttgctcttgatgagtcacattttgaagaa
cgacataaatgtattaacttccttgtagagatttatggttatatgcctctattatacacg
cagtttagagttgattctatcctgttcaaaaccaggatatctcatgataaacagaaatgt
tttaaatttatttga
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