Ruditapes philippinarum (Manila clam): 132733427
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Entry
132733427 CDS
T09557
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 1-like
KO
K06054
hairy and enhancer of split 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03460
Fanconi anemia pathway
rphi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132733427
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132733427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132733427
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132733427
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
132733427
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
132733427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
HDV_ag
Motif
Other DBs
NCBI-GeneID:
132733427
NCBI-ProteinID:
XP_060576058
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MRLSSDYFYISRFYRLLRVGPIGSACSMTRECKARCDWLRVSTSVHGTVMFTFRYSHAHQ
GINTWEFDFLDHTRNTDTRRNIPTLRKNNFGIISVIFFMDKSKMCDTKVSPVRPDTSSSY
LRKIKKPLIERKRRERINNCLSQLKSILLENIKQNGGTQVSKLDKADILEMTVSHLRQIH
HQQLSAAMAASTSVVQRYREGYMECATEAVRYMETSRAYPNDMVLRVRTNLAHKMGYSHS
QPLSSESYRNDYSTVNDLSVLSDISATSTPVKVKVESPNSSAISTDSGFYSAFSPLLMQV
PRVKQERDISTTSHCLSDSSDESVHEHDDDNDKPSSSQSTKPSTSSKLSLPVRVPVSVGD
SPSQKQVWRPF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtcatcagattatttttacatttcgagattttatcgtctgctgcgtgttgga
ccaatcggaagcgcgtgctcaatgactcgtgaatgtaaagcgcgctgtgattggctgaga
gtatcgacatctgttcacgggaccgttatgtttacattccgatacagccacgcgcatcag
ggcataaatacgtgggaatttgactttttggatcatactcggaataccgatacacgaaga
aacattcctacattacggaaaaataactttggaattatttctgttatatttttcatggat
aaatctaaaatgtgcgacacaaaagtttcaccagtgcgaccagacacttcgtcttcttat
cttagaaagataaagaagccgctaattgaaagaaagcgaagagaaagaatcaacaactgt
ctgtctcagctgaaatcgatcctattggaaaacataaaacaaaatggaggtactcaggtg
tcaaaactcgacaaagcagatatcttagagatgacagtgagccatctacgtcagattcac
caccaacagttgtcggctgctatggctgccagcacgagcgttgttcagaggtaccgtgag
ggttacatggagtgcgcaaccgaggctgtacgttatatggaaacatcaagagcatatccg
aatgacatggtattgcgcgtgcgtacgaatctcgcgcataaaatgggatattctcattca
cagcctttgagcagtgaatcttaccgaaatgactacagtaccgtgaatgacttgagtgtt
ttaagtgacattagtgctacaagcacgcctgtgaaggtcaaggtcgaatcaccaaattcg
agtgctatttctacggacagtggtttttacagtgcattttcaccattattaatgcaagta
ccacgtgttaaacaggagcgtgacatctcaacaacttcacattgtttaagtgacagctcc
gatgagtctgtacatgaacatgatgacgacaacgacaaaccaagttcttcgcaatcaact
aaaccatccactagttctaaactgtcacttccggtgagagttccggttagtgtaggcgat
tcaccatctcagaaacaagtctggagaccattctaa
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