Ruditapes philippinarum (Manila clam): 132733876
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Entry
132733876 CDS
T09557
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132733876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132733876
Spliceosome [BR:
rphi03041
]
Complex C
Other components
Step II factors
132733876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
132733876
NCBI-ProteinID:
XP_060576585
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MAFSTSLPPSVIAKQAKTDESDEPQKKSREDYKKMKELEEARKAGTVPAMQDEEGKDINP
HIPQYIMQVPWYFGEHRPTLKHQRPQPEKQKDFSKLTQWFNKGVKDGAITTKFRKGACEN
CGAMTHKKKDCLERPRKIGAKFTGDSFAPDEHIQPDLEFDYEGKRDRWNGYNPDEHQRVY
EEFEKIEQAKRMLKEHDIEKELLEGNEDTEERTDTQTKDDSDDEDKYADDVAMPGQKFET
KQRITVRNLRIREDTAKYLYNLDVNSAYYDPKTRSMRDNPFQNTGKEQQTQYHGDNFTRY
SGDAQNFAKKQVFAWEAYEHGSDVHIQADPTKLELLAREVKQRKEDTKVQAKNSILEKYG
GEEHLEAPPKQLLLAQTEDYVEYSRHGTVLKGAEKPVVRSKYEEDVYINNHTSVWGSYWH
AGSWGFKCCCSTIKESYCTGQAGIDAAHERSLIPVEEEQEEIPQKSLLEQHQEKSKDKKK
KKKKKNKHKKKKKRESSSESDDSDLSEAEMERRKEKKLKKALKRELESQKKAEVFLAMDE
RKRPYNSMFEAKAPTEEEMEAWRMKRRREEDPMSNFT
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctccaccagtttgccgccatctgtaatagccaaacaggctaagacagatgag
tcggacgaaccacagaagaagtcgagggaggactataagaaaatgaaggagcttgaagag
gcgagaaaagctggtacagtgccagcaatgcaagatgaagaaggaaaggacataaatcca
cacattcctcagtatattatgcaagtaccgtggtattttggggaacaccgtcctacatta
aaacatcaaaggccacaaccagagaaacaaaaagatttctctaaactcacacagtggttc
aataaaggtgttaaagatggggcaatcactaccaagttcaggaaaggcgcttgtgaaaac
tgtggtgcaatgacacataagaaaaaagattgtctagagcgaccaagaaagattggtgct
aagtttacaggtgatagttttgctccagatgaacatatacagccagatttagagtttgac
tatgagggaaagagagatagatggaatggttataatcctgatgaacatcaaagagtttat
gaggagtttgagaaaatagaacaggcaaaaagaatgttaaaggaacatgatatagagaaa
gagttgttggagggaaatgaagatactgaagaaagaacagacacacaaacaaaggatgac
tcagacgatgaagataaatatgctgatgatgttgccatgccaggccagaagtttgaaacc
aaacagagaattactgtgagaaacttacgtatacgtgaagatactgccaagtatttgtat
aacctggatgtgaactcggcctactatgatcctaaaacaagatccatgagagataaccca
ttccagaatacaggcaaggaacaacaaactcagtatcatggtgacaattttacaagatat
tcaggggatgcacaaaactttgctaaaaaacaagtatttgcgtgggaagcatatgagcat
ggttcagatgtacatattcaggctgatcctacaaaacttgaacttttggctagagaggtc
aaacaacgtaaagaagatacaaaagttcaggcaaagaacagtatcctagagaaatatgga
ggggaggaacatttagaagctccaccaaaacaattattactggctcaaacagaagattat
gtagagtattcgagacatggtacagtgttaaaaggggcggagaaacctgtagtacgatca
aaatacgaagaggatgtttatattaataaccatacaagtgtttggggatcatattggcat
gccgggagttgggggttcaaatgttgttgttcaaccataaaagaatcatactgtaccggc
caggcaggcatagatgctgcacatgagagaagtcttatacctgtagaagaggaacaagaa
gaaattccacaaaaatctttattagaacaacaccaagaaaagtcaaaagataaaaagaag
aagaaaaagaagaagaataaacacaagaagaagaagaaaagggagagcagtagtgagagt
gatgatagtgatttatccgaggccgagatggagagacgtaaagagaaaaaattaaagaag
gctctgaagagagaattggaaagtcagaagaaagctgaggtattcctggcgatggatgag
agaaagagaccatataacagtatgtttgaggctaaagccccgacggaggaggaaatggag
gcttggaggatgaagcgtcggagagaggaggacccaatgtcaaactttacatga
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