Ruditapes philippinarum (Manila clam): 132734007 Help Entry 132734007         CDS       T09557                                  Name (RefSeq) polyubiquitin-C isoform X1   KO K08770   ubiquitin B/C Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi04120   Ubiquitin mediated proteolysis rphi04137   Mitophagy - animal rphi04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     132734007  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     132734007    04137 Mitophagy - animal     132734007  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rphi04121]     132734007   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:rphi04147]     132734007 Ubiquitin system [BR:rphi04121]  Ubiquitins and ubiquitin-like proteins   Ubiquitins    132734007 Exosome [BR:rphi04147]  Exosomal proteins   Exosomal proteins of breast milk    132734007   Exosomal proteins of other body fluids (saliva and urine)    132734007   Exosomal proteins of colorectal cancer cells    132734007   Exosomal proteins of bladder cancer cells    132734007 SSDB OrthologParalogGFIT Motif Pfam:  ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 Motif Other DBs NCBI-GeneID:  132734007 NCBI-ProteinID:  XP_060576690 LinkDB All DBs Position Unknown AA seq 685 aa AA seqDB search MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED GRTLSDYNIQKESTLHLVLRLRGGQ NT seq 2058 nt NT seq  +upstreamnt  +downstreamnt atgcagatctttgtgaaaaccctcactggaaagaccatcaccctcgaggttgagccctca gattccattgaaaatgtgaaggctaagattcaggacaaagaaggtattcccccagatcag cagagattgatctttgctggcaaacagttggaagatggccgaacattgtcagattacaac atccagaaggaatccacacttcatcttgtacttcgtcttagaggaggtatgcaaatcttt gtgaaaaccctcactggaaagaccattaccctcgaggttgagccctcagattccattgaa aatgtgaaggctaagattcaggacaaagaaggtattcccccagatcagcagagattgatc tttgctggcaaacagttggaagatggtcgtactttgtcagattacaacatccagaaggaa tccacactccatcttgtacttcgtcttagaggaggtatgcagatctttgtcaagaccctc actggcaagaccatcaccctcgaggttgagccctcagactcaattgaaaatgtgaaggca aaaattcaggataaagaaggtattcccccagatcagcagagattaatctttgctggcaaa cagttggaagatggtcgtactttgtcagattacaacatccagaaggaatccacactccat cttgtacttcgtcttagaggaggtatgcagatctttgtcaagaccctcactggcaagacc atcaccctcgaggttgagccctcagactcaattgaaaatgtgaaggcaaaaattcaggat aaagaaggtattcccccagatcagcagagattgatctttgctggcaaacagttggaagat ggccgaacattgtcagattacaacatccagaaggaatccacacttcatcttgtactacgt cttagaggaggtatgcagatctttgtcaagaccctcactggcaagaccatcaccctcgag gttgagccctcagactctatcgagaatgtgaaagcaaagattcaggataaagaaggtatt cccccagatcagcagagattgatctttgctggcaaacagttggaagatggtcgtactttg tcagattacaacatccagaaggaatccacactccatcttgtacttcgtcttagaggaggt atgcagatctttgtcaagaccctcacaggtaaaaccattacactcgaggttgagccctca gattccattgaaaatgtgaaggcaaagattcaggacaaagaaggtattcccccagatcag cagagattgatctttgctggcaaacagttggaagatggtcgtactttgtcagattacaac atccagaaggaatccacacttcatcttgtacttcgtcttagaggaggtatgcagatcttt gtcaagaccctcacaggtaaaaccattacactcgaggttgagccctcagattccattgaa aatgtgaaggcaaagattcaggacaaagaaggtattcccccagatcagcagagattgatc tttgctggcaaacagttggaagatggccgaacattgtccgattacaatatccagaaggaa tccacactccatcttgtacttcgtcttagaggaggtatgcagatctttgtcaagaccctc accggcaaaaccattacacttgaggttgagccctcagattccattgaaaatgtgaaggca aagattcaggataaagaaggtatccccccagatcagcagagattgatctttgctggcaaa cagttggaagatggtcgtactttgtcagattacaacatccagaaggaatccacacttcat cttgtacttcgtctaagaggaggtatgcagatctttgttaagacactcactggcaaaacc atcactctagaggttgagccctcagactcaattgaaaatgttaaggcaaagattcaggac aaagaaggtatccccccagatcagcagagattgatctttgctggcaaacagttggaagat ggtcgtactttgtcagattacaacatccagaaggaatccacacttcatctagtacttcgt cttagaggtggccagtga

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