Ruditapes philippinarum (Manila clam): 132734007 Help Entry 132734007         CDS       T09557                                  Name (RefSeq) polyubiquitin-C isoform X1   KO K08770   ubiquitin C Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi04120   Ubiquitin mediated proteolysis rphi04137   Mitophagy - animal rphi04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     132734007  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     132734007    04137 Mitophagy - animal     132734007  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rphi04121]     132734007 Ubiquitin system [BR:rphi04121]  Ubiquitins and ubiquitin-like proteins   Ubiquitins    132734007 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 Ubiquitin_5 Motif Other DBs NCBI-GeneID:  132734007 NCBI-ProteinID:  XP_060576690 LinkDB All DBs Position Unknown AA seq 685 aa AA seqDB search MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED GRTLSDYNIQKESTLHLVLRLRGGQ NT seq 2058 nt NT seq  +upstreamnt  +downstreamnt atgcagatctttgtgaaaaccctcactggaaagaccatcaccctcgaggttgagccctca gattccattgaaaatgtgaaggctaagattcaggacaaagaaggtattcccccagatcag cagagattgatctttgctggcaaacagttggaagatggccgaacattgtcagattacaac atccagaaggaatccacacttcatcttgtacttcgtcttagaggaggtatgcaaatcttt gtgaaaaccctcactggaaagaccattaccctcgaggttgagccctcagattccattgaa aatgtgaaggctaagattcaggacaaagaaggtattcccccagatcagcagagattgatc tttgctggcaaacagttggaagatggtcgtactttgtcagattacaacatccagaaggaa tccacactccatcttgtacttcgtcttagaggaggtatgcagatctttgtcaagaccctc actggcaagaccatcaccctcgaggttgagccctcagactcaattgaaaatgtgaaggca aaaattcaggataaagaaggtattcccccagatcagcagagattaatctttgctggcaaa cagttggaagatggtcgtactttgtcagattacaacatccagaaggaatccacactccat cttgtacttcgtcttagaggaggtatgcagatctttgtcaagaccctcactggcaagacc atcaccctcgaggttgagccctcagactcaattgaaaatgtgaaggcaaaaattcaggat aaagaaggtattcccccagatcagcagagattgatctttgctggcaaacagttggaagat ggccgaacattgtcagattacaacatccagaaggaatccacacttcatcttgtactacgt cttagaggaggtatgcagatctttgtcaagaccctcactggcaagaccatcaccctcgag gttgagccctcagactctatcgagaatgtgaaagcaaagattcaggataaagaaggtatt cccccagatcagcagagattgatctttgctggcaaacagttggaagatggtcgtactttg tcagattacaacatccagaaggaatccacactccatcttgtacttcgtcttagaggaggt atgcagatctttgtcaagaccctcacaggtaaaaccattacactcgaggttgagccctca gattccattgaaaatgtgaaggcaaagattcaggacaaagaaggtattcccccagatcag cagagattgatctttgctggcaaacagttggaagatggtcgtactttgtcagattacaac atccagaaggaatccacacttcatcttgtacttcgtcttagaggaggtatgcagatcttt gtcaagaccctcacaggtaaaaccattacactcgaggttgagccctcagattccattgaa aatgtgaaggcaaagattcaggacaaagaaggtattcccccagatcagcagagattgatc tttgctggcaaacagttggaagatggccgaacattgtccgattacaatatccagaaggaa tccacactccatcttgtacttcgtcttagaggaggtatgcagatctttgtcaagaccctc accggcaaaaccattacacttgaggttgagccctcagattccattgaaaatgtgaaggca aagattcaggataaagaaggtatccccccagatcagcagagattgatctttgctggcaaa cagttggaagatggtcgtactttgtcagattacaacatccagaaggaatccacacttcat cttgtacttcgtctaagaggaggtatgcagatctttgttaagacactcactggcaaaacc atcactctagaggttgagccctcagactcaattgaaaatgttaaggcaaagattcaggac aaagaaggtatccccccagatcagcagagattgatctttgctggcaaacagttggaagat ggtcgtactttgtcagattacaacatccagaaggaatccacacttcatctagtacttcgt cttagaggtggccagtga

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