Ruditapes philippinarum (Manila clam): 132734395
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Entry
132734395 CDS
T09557
Name
(RefSeq) thyroid receptor-interacting protein 11-like isoform X1
KO
K23368
thyroid receptor-interacting protein 11
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132734395
Membrane trafficking [BR:
rphi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
132734395
Retrieval pathways
132734395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab11-FIP3
APG6_N
CCDC39
ATG16
CENP-F_leu_zip
GRAB
GRIP
Motif
Other DBs
NCBI-GeneID:
132734395
NCBI-ProteinID:
XP_060577112
LinkDB
All DBs
Position
Unknown
AA seq
2496 aa
AA seq
DB search
MSWLGGSFSSLTGQLSNLTKDILTEGTEEVSDHVTELRLAQEKIKELDTVCVSQKIEIDR
LKLLNREAEEKAEGSELQINRISTEYRTLLEEKEKEIKTLKHEVQELKSSYVSSETQPAV
LRLDSDNGFESVSYGGDEHDFSDSIAMQHDINRLRSDLRQVQAQCQHWKELVQQQNKFGD
GSVPDSKDNEAVLKKQLQELQHQLAHEKDSRQHELSALQDSQTHKLAQMRKKHKEEIAQL
KAKMQEMDWGSEGWESQVPEETASLKASIAALNEEITNLKSERESNLKQITSLKESVEGY
QSELSVKQAHSLHLENQLKVAKEEIKRLEEDRDQVGRDLVETKEQLLDQLDANHADTLEI
LSDLRDVRQQMDMKAIDRRNKLLLEKDKLVNQLISSNEQKKELESAVSNLTDLNDSLRNE
TQSLAEELGDKEQQKLTAGVMDSLEKETLVLREQNVGLQEQVALLEKALQNVNQERLTVR
VSSSSDLPSGADDLMIASDSASLTSDLSEISRRNLELDEQVNTLKGQISNYETEINQFEM
MQSDWLSEKEALEGVLVELRNQLKAKENSLNVAEAKKGLLAVAKHEASTSGLPDLIDPTA
AIDGMGETSSNSMVEEIEPNKDSMAEIADEVVELDRKVGLLTEANAQLEQERDLLVEEKA
ALQKEVTTLKSTLLCQSASTTDNSKTEAGKIQKESFLNGPLKEKEMELQALVGGRDDSEE
NRGESPEDKLQDKEEMETLIQSQKEEIEALEKETVELKKKLRGKNEEIVNLSLEKEEMMT
SLEELDNQHQEAMSHIIKIKDQVSKSNEDLKKKLAQSEAEKRSMQGEFDKLKTLNQSAES
SSSNELNHQIAELKDETSDLRQKLEKSNGTIAALQKELSRKEDELNEMSDKLASSAEALN
NLHMDKQELQEKVNKLKADLSSQADKLKTLKAEKEKIKQDLETSGANDSNENDESQDSSE
TETEQLNLQVSQLSSDLENANEQLKEKSVECKRLAGLLKKAEDMHNEFNKTIEVSDAENT
TLRSKISQLEAEELSLKEKLTAASLDCEKLKEESERKTSECESFSRHIHAVENKVTTVKT
ELSEKIKENTQLSSQVEIHKNELSILKQKLKEKEAGYESLHKENAKVKDLLEDTADKLHS
KCEECQILTEKVDQLKGELEESVNSVENEYEAQLLSATGELVLVKEELASRTEEWEKLDN
ELYLKDEEISKLKEGKSAMQKEIEHLKVEFDHVKEASETNSKEAYELVLQEKQVQIDTLT
AECSRLKSERTSLDQKTTDQKQHYENYIKELKSVSETDSSDHQTQFNELLEKSHKKDLQI
SENESKLSNIYAQLQDCQKELETLEEKNQDLQTDCDAYIQEISKLKKLVEKLSSENESML
KSVKEQELTEAELNSVQEELDAVKTEKLSLESEIQNSNSQKCKILEESKIEKDLLNSQIK
ELQNELNSLKQGEYGNQNTQDQLERERESLKERVSYLETELEKNKQLIKDQEAGIADLNQ
KRADLLQELNKDSEKIKSQDGIIEVLKHNAVQKEDEITLLTRKLNRAKSFIDEEQIIQVE
SAGNNSVPQYNLPALEYIHKSEVQKPEVEEKIVKVETQKMLGMQTPNGDLATEHTEHVHD
VILEIEKLQGQLKEKDNIISELQRNNASLLKIMDSKSKSQGDNSLSEMHKLENEVRSLKT
EREQMMDVLNEKSRESSNSKAEISKLMNIVAAQKTALEKLQKDNQDIIAKRSPDGDGAHL
DDMQKETVKNLSRIIRDKDLEIESLTQKNATLLSVLQESSTEGAQINSLMSEKDTLVKQL
AVLQGEREQMITYLNQKHQESVAYHAEVQRLTAFINTENEKNEKIKSAYEQLVPQFEDKK
QSLLKAQNELINYKQKLQELEVKTGKMIQQTESGETVDKTLYDAKIQENTKLQERYQELI
ENVKEKETKIQNMYQQVSDMEQNFRASDSERASYKKQVDSYMFQVHGLQTEQGDLKTEIT
QLKQQRDSLSSEFQGLKDANHKLTLQLQDRDFEVSSLQEKSRSLTSMIQEQQGEKGQLEH
VIQENETTQKHIKQLTYERDQALLGRQHTQEQNNQLLKDIQSLKEREAKLNRELNRLRQH
LIQIEEGYTKEALAAEEREKDLRTRLTSAEENALHSSSAVESANQHASQQLDSLQQQLHF
VSQQRDQAYLQISSLQEQNQMYSSSMTNLQMVLEEFQHEKERMVAEETERYTKEVKTLRE
QVNKLQADLKYTKEQLEEASDGLEAASRLSEQLDRKEEALDALREEVQIRESGLKVVEDE
LRNLKSRNDDRVDKLVIKNLFLGYFTAPQNSKHEVLRAIGGVLQFSSEDFEKIDGKHSGG
GWVPGFLRFSGGQKTSSPPTTPVRRSTIGATPSKPVDNSFSQMFVKFLERESSPPPPTVR
LPAEEMVRDVQKQKETHKPAYNPFTAPRHVAMPTGGTPTLGTPNTQHLLMSSTVSVSQTL
PTFAAPTESSKTPPGSGRNTPASTTSGAILKDVLNR
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggttgggaggcagtttttcctcgttgacaggtcaactgtcaaatctcacaaaa
gatattttgactgaaggaacagaggaagtgagtgatcatgtgactgagttacggctcgcc
caggagaaaattaaggagcttgacacggtgtgcgttagtcagaagatcgagatagatcgt
ctgaagttattaaatagagaagcggaggagaaagctgaagggtcagaattacagataaat
agaatatctacagaatacagaacattactagaggaaaaagaaaaagaaataaagacatta
aagcatgaagtacaggagttgaaaagttcctatgtgagttcggaaacgcaacctgcagta
ctccgacttgacagtgacaatggttttgaaagtgttagctatggaggggatgaacatgac
tttagtgacagtattgccatgcaacatgacatcaaccgtctccgtagcgacctgcgtcag
gttcaagcccagtgtcagcattggaaagagcttgttcaacaacaaaataaatttggagat
ggatctgtgcctgatagcaaggacaatgaagctgtactcaaaaaacaattacaggaacta
caacatcaactggcacatgaaaaggactccaggcagcatgagttatctgcccttcaagac
tcacaaacacacaaacttgctcagatgcggaaaaaacacaaagaagagattgctcaactc
aaggccaagatgcaagaaatggattgggggtcagagggctgggaatctcaggtacctgag
gagactgccagtctgaaagcatctattgcagcattaaatgaagaaatcacaaaccttaaa
tcagagagagaatctaacttgaaacagataacaagtctgaaggaatcagtggagggatac
cagtctgaattatctgtcaaacaggcacacagtctacatctagaaaaccagcttaaagtg
gcaaaagaggagatcaagcgtttggaagaagaccgtgatcaggtgggcagagatttagtg
gaaactaaagaacaactcttagatcagctggatgcaaaccatgctgatactttggagata
ttgagtgatttacgggatgtccgtcaacagatggatatgaaggccattgaccgtagaaat
aagttactcttggaaaaagataaacttgttaatcaattgatttcatcaaatgaacagaag
aaagaattagaaagtgctgtaagtaacttaactgatctgaatgattcactgaggaatgaa
acccagtcattggcagaagaactaggggacaaagaacaacaaaaactaactgctggagtg
atggacagtttagagaaggaaacacttgtattgcgtgaacagaatgtaggtttacaggaa
caagttgctctactagagaaagctttacaaaatgttaaccaagaaagactgactgtcaga
gttagctcaagttctgacctaccgtctggtgccgatgatttaatgatagccagtgactct
gcctccctgacctctgacctttcagaaatttctagacgtaaccttgaacttgatgagcag
gtcaatacacttaaaggtcaaatctcgaactatgaaacagagattaatcaatttgaaatg
atgcaatctgattggttgagtgaaaaggaggctctggaaggggtacttgtagagctgaga
aatcagttgaaagctaaagagaattcactaaatgtggcggaagctaagaagggtttgtta
gctgttgctaagcatgaggctagtacttctggccttcctgaccttattgaccctactgct
gccattgatggtatgggggagacttctagtaacagtatggtggaggaaattgaaccaaac
aaagatagtatggcagagatagctgatgaagtggtagagctagatagaaaagttggatta
ttaactgaggctaatgcacagttagagcaagagagagatttgttagtagaggaaaaggca
gcactgcagaaagaggtaacaaccttgaaatcaacattgttgtgtcagtctgcctccacc
actgataactctaagacagaagcagggaaaatacaaaaggaatcttttttaaatggtcca
ttgaaagaaaaagagatggaacttcaggctttagtgggtggaagagatgactcagaagaa
aataggggcgaatcacctgaagacaagttacaagacaaggaagaaatggaaacactaata
caatcacaaaaagaagaaattgaagcattggaaaaagaaactgttgagttaaagaaaaaa
ttaagaggtaagaatgaagaaattgttaatttgtcactagaaaaggaagaaatgatgact
agtttagaagagttagataaccaacatcaagaagccatgagtcatatcataaagataaaa
gatcaagtttcaaaatcaaatgaggatttgaagaaaaaattggctcaatcagaagcagag
aagaggtctatgcaaggagaatttgataaactcaaaaccctaaaccagtctgctgaatcc
tcatcatcaaatgagttgaatcatcagattgccgagttaaaagatgaaacatctgatctt
cgacagaagcttgaaaaaagcaatggaaccattgcagcactacagaaagagctgagcagg
aaagaagacgagctgaacgaaatgagtgacaaactagcatcaagtgctgaagctttgaat
aacttacatatggataagcaagaactgcaagaaaaggtaaataaattaaaagcagattta
agttcccaagcggataagcttaagacattaaaagctgaaaaggaaaaaattaaacaagat
ctggaaacttctggcgcaaatgactctaatgaaaatgatgaaagtcaggactctagtgaa
acagaaactgaacagttgaatttacaagtaagtcagcttagctcagacttagaaaatgcg
aatgaacagttaaaagaaaagtcagttgaatgtaaaagattggctggtcttttgaaaaaa
gcagaggatatgcataatgaatttaataagacaattgaggtttcagatgcagaaaatact
acattaagatctaagatttcacagcttgaggctgaagagcttagtcttaaagaaaaactc
acagctgcaagtcttgattgtgaaaaattgaaagaagaaagtgaaagaaagacctcagaa
tgtgaaagttttagtagacacatacatgctgttgaaaataaggtaacaactgtcaagact
gaactttcagaaaaaataaaagaaaatacccagttatctagtcaagtagaaattcataag
aatgagttatcaattttaaaacagaagttaaaagagaaagaggcagggtatgaatcatta
cacaaagaaaatgcaaaagtaaaagacttattagaggacactgctgataaattacattcc
aaatgtgaagagtgccagatattgactgaaaaagttgatcaattaaaaggtgaattagaa
gagtctgtcaattctgttgaaaatgaatatgaagctcaattgttaagtgcaacaggtgaa
ctggttttagtaaaggaagaattagcaagtaggacagaggaatgggaaaagctggacaat
gaactctatttaaaagatgaagagatctccaagctaaaggaaggaaaaagtgcaatgcaa
aaagagattgaacatttaaaggttgaatttgatcatgttaaagaggcaagtgaaacaaat
tccaaagaagcatatgagttagttttgcaagagaagcaggtgcaaattgataccttgaca
gctgagtgttctcgactgaaaagtgaaagaactagtcttgatcagaaaactactgatcaa
aaacaacattatgaaaattatataaaagaactaaaatcagttagtgaaacagattcatca
gaccaccaaacacagtttaatgaattactggaaaagtctcataaaaaagatctacaaatt
tctgaaaatgaatcaaagcttagtaatatatatgcccagctacaggattgtcagaaggaa
ttggagacattggaagaaaaaaatcaagatctgcaaactgactgtgatgcttacattcag
gaaatttctaaactcaagaaattagtagaaaaattatcttctgagaatgaaagcatgtta
aaatctgtaaaggaacaagaacttactgaagcagaattgaacagtgttcaagaggagcta
gatgcagttaaaactgaaaaactgtcccttgaaagtgaaattcagaactctaattcccag
aaatgtaaaatccttgaggagagcaaaattgaaaaagatctgttgaattcccaaataaaa
gagttacaaaatgaattgaattctttaaaacaaggtgaatatggtaaccagaatactcaa
gatcagctggagcgtgaaagagaatcattaaaagagagagtaagttatttggaaactgag
ttagagaagaataaacaactcattaaggatcaagaggcaggcatagcagacttaaatcag
aaaagagcggatcttctgcaagagttaaataaggactcagaaaaaataaaatcacaagat
ggtatcatagaggtgcttaaacataatgctgttcaaaaggaggatgaaattactttgctt
acccgtaaacttaatcgtgccaagtcatttattgatgaagaacaaataattcaagttgag
agtgcagggaacaactcagtacctcagtataacctacctgctctagagtatatacacaag
agtgaagttcagaaaccagaagttgaagagaagatagtaaaagttgaaactcagaagatg
ttgggtatgcagacacctaacggtgaccttgccacagagcatacagaacatgtgcatgat
gtcatactggaaatagaaaaacttcaagggcagttgaaagaaaaagacaacatcatatca
gagttacaaagaaataatgcctcattgctgaaaataatggactccaaatccaaatctcag
ggggataattctctatcggagatgcacaaacttgaaaatgaagtaagatccttgaagact
gaaagggaacagatgatggatgttctgaatgaaaagtccagggaaagcagcaattcaaaa
gctgaaatttcaaagctaatgaatattgtagctgctcaaaagactgcacttgaaaagtta
cagaaagataatcaagatataattgcaaaaagatcgccagatggtgatggtgctcattta
gacgacatgcaaaaagaaactgttaaaaacttatcaagaataataagagacaaagatctt
gaaatagaatcattgactcagaaaaatgcaacactgttgtcagtactgcaggagtcttca
actgaaggtgctcaaattaattcacttatgtctgaaaaagataccctggttaaacagtta
gcagtgttacaaggtgaaagagaacaaatgataacatatctgaaccagaaacatcaggaa
agtgtggcttatcatgcagaggttcaaaggttaaccgcatttataaatactgaaaatgaa
aaaaatgaaaaaataaaatcggcatacgaacaactggtgcctcagtttgaagataagaaa
caatcattactaaaagctcagaatgaattgataaattataagcagaaattacaagaatta
gaagtaaaaactggtaaaatgattcaacagactgaatcaggagaaactgtagataaaact
ttgtacgatgcaaagatacaagaaaataccaaacttcaagaaaggtatcaagaactcatt
gaaaatgttaaagaaaaagaaacaaagatacaaaatatgtatcagcaggtcagtgacatg
gaacagaactttagagctagtgatagtgagagggccagttataaaaagcaagtagacagt
tacatgtttcaggtccatggtttacaaacagagcaaggtgatttgaaaactgaaattact
caactgaaacaacagcgagattctttgtcatcagagtttcaggggcttaaagatgccaat
cataaattaacgctgcagctacaggatcgagactttgaggtttctagtcttcaggagaag
tcaaggtcacttacctcaatgatacaagagcaacaaggtgagaagggacaacttgagcat
gtcattcaagagaatgagacaacacagaaacatatcaaacagttaacttacgagagggac
caggcgttactagggagacaacatacacaagaacaaaataaccagttattgaaagatata
cagtctttaaaagagagggaagcaaagttgaatcgagaattaaatagattaaggcaacat
ttaatacagatagaggaaggctacacgaaggaagcactggcagcagaagagcgggagaaa
gacttgcgcacacgacttacttctgctgaggaaaatgcgttacattcttcatctgctgtg
gaatcagcaaatcagcatgccagtcaacagttagacagtctacagcaacagctacatttt
gtatcacaacaacgtgaccaggcatatcttcaaatatctagtctacaagaacaaaaccag
atgtactctagctcaatgactaatctacagatggttctagaagaattccaacatgagaaa
gaacgaatggttgccgaggaaacggaaagatacaccaaggaggtgaagacgctaagagag
caagtgaataaattacaggcagacctaaaatacacaaaggagcagttagaggaggcgtca
gatggactagaggctgcgtcaagactcagcgagcaacttgacaggaaggaggaggccctc
gatgccctcagagaggaagttcaaatccgtgaatcaggactgaaagttgtagaagatgag
ctgagaaacctgaagagtagaaatgatgacagggtggacaagttagtgataaagaattta
ttcctgggatacttcacggcccctcagaatagtaaacatgaggtgttacgggcaattggt
ggtgtgctacagttctcatcagaagattttgaaaagattgatggtaagcacagtggaggg
ggttgggtaccaggctttttaaggttctctgggggacagaaaacatcctcaccccctaca
acaccagtgagaaggtcaactattggggctacaccttcaaaaccagtagataattcattt
tcccaaatgtttgtcaaatttttggagcgcgaatcgtcgccaccaccaccaacggtccgc
ctgcctgcggaggagatggtaagagatgtacagaaacagaaagagacacataaaccagct
tataatccattcacagcaccgagacatgttgctatgccaacaggtggaacgcctacgtta
ggaacaccaaatacacaacatttattaatgagttcaacagtttcagtttcacaaacttta
ccgacatttgcggcaccgacagaaagttcgaaaactccgcctggatcaggtcggaataca
ccggcttccacgacttctggggcgatattaaaagatgtgttaaatagataa
DBGET
integrated database retrieval system
