Ruditapes philippinarum (Manila clam): 132734763
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Entry
132734763 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132734763
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132734763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132734763
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132734763
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132734763
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
132734763
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
132734763
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
132734763
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
132734763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RVT_1
Exo_endo_phos_2
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
132734763
NCBI-ProteinID:
XP_060577593
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MGDFNYRDIDWKHWISSAPENHVSHEFIEAVRDSYLHQNIEFYTRYRNGQRPSTLDLVFS
SEELLVNNIEHFSPLGKSDHIVITFGIDCNSSNEAYMKESFTYDRGNYDEMKTYLSNVDW
ISEFQDLNNIPYINDRSSGKSILEVQFNEQITMKLLENLNVTKSCGPDFLHPRVLKEVKN
AICLPLTLLFHQSFEEEETPIDWKTANVKARQRVVIGSEKSQWTEVTSGIPQGSVLGPTL
FLIYINDIEDAIEGTLRLFADDTKLYNLANDDADIEKIQSDNDKLSIWSEKWLLKFNANK
CTTLHYGNHNVNNTYHLKVNNTRNEISNSESVKDLGVTFDVNMKFRQQINDCINKGNKIT
GLMRRTFLHFTVKSFGKLFKTLVRPHLEYGNIIWNPRFKKDINAIESVQRRATKLVGQLR
NLSYEQRLKTLKLPSLAYRRFRGDMIEVFKLLHHKEDINYEVFFELNNNANTRGHGYKLK
VKSCRTEIRKHFFSLRVISDWNNLPEVVVNAPSLNSFKNRLDKFMGETQYTTIPDQNWVQ
NHGGVIEDDDDVLRPQLQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttcaactatcgtgatatagactggaagcattggatttcaagtgcgcctgaa
aatcatgtaagtcatgaatttatagaagctgtacgtgatagttatcttcatcaaaacata
gaattttatacaagatacagaaacggccaaagaccaagtactttagatcttgttttctca
tcagaagaacttttagtgaacaatattgaacacttcagtcccctgggtaaaagtgaccat
atagtgattacctttggtattgactgtaattccagcaatgaggcatacatgaaagagtca
tttacttatgatcgaggaaactatgatgaaatgaaaacttacttgagtaatgttgattgg
ataagtgaatttcaagatttgaacaatattccatatataaatgatagaagttctggtaaa
agtatcttggaagtacagttcaatgagcaaattaccatgaaattacttgaaaatcttaac
gtaactaaatcatgtggacctgatttcttacaccctagagtcctgaaagaagttaagaat
gcaatatgtttaccattgactcttttatttcatcaatcttttgaagaagaagaaacaccg
attgactggaaaacggcaaatgtgaaagcaagacaaagggttgtaattggtagtgaaaaa
tctcaatggactgaagtcaccagtggtattccacagggaagtgtcttaggacctacacta
tttttgatttacattaacgacatagaagatgccattgaaggaacattgcgtttatttgct
gatgatacaaaactgtacaatttagcgaatgatgatgcagatatagagaaaattcaatct
gacaatgacaaattaagtatatggagtgaaaagtggttacttaagtttaatgcaaacaag
tgcactacattacactacggaaatcataatgtcaataatacctaccatcttaaagtaaac
aacaccagaaatgaaatttcaaacagtgaatctgtaaaagaccttggagttacttttgat
gtgaatatgaaatttagacagcaaataaatgattgcatcaataaaggaaataaaattaca
ggactaatgagaagaacatttctgcatttcacagtgaaatctttcgggaaattatttaaa
accctagttaggcctcatctagaatatggaaacattatttggaatcctcgttttaagaaa
gacatcaatgcaattgaatcagtacaaagacgtgcaacaaaactagttggtcaactaaga
aatctgtcatatgaacaacgacttaaaacactgaaattgccgtcactagcatatcgtcga
tttagaggtgacatgattgaagtttttaaattgttacatcataaggaggatattaactat
gaagtgttttttgaattaaataacaatgcaaatacaagaggtcatgggtataaactgaaa
gtgaaatcatgtagaactgagattagaaagcatttcttttctctacgggttatctcggac
tggaacaatttaccagaagtggttgtgaatgctccttcacttaatagctttaaaaacagg
ttggacaaattcatgggagaaacacagtataccaccataccggatcagaactgggtacaa
aaccatgggggggttatagaagacgatgatgacgtcttgcgacctcaactccagtaa
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