Ruditapes philippinarum (Manila clam): 132735055
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Entry
132735055 CDS
T09557
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132735055
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rphi04812
]
132735055
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
132735055
Membrane trafficking [BR:
rphi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
132735055
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
132735055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
TIP49
AAA_22
Vps4_C
AAA_5
Mg_chelatase
AAA_14
MIT
AAA_16
DUF815
AAA_2
IstB_IS21
nSTAND3
RNA_helicase
AAA_24
NPHP3_N
AAA_17
Motif
Other DBs
NCBI-GeneID:
132735055
NCBI-ProteinID:
XP_060577939
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNRKGPGRPWGRKRAENKSKAKPIDHGGFHRRNFRIIAAPLLFIFSVLRTIAFQLWVVLG
IIACKGSAIRGISQQRAGYRPQRDAEVGISMSSKAQRSPGPVDPMIATQKHHHRKAFEYI
SKALKIDEEDGRKDVAVELYRKGIAELQKGVAIDIKGQGESWDKARRLQEKMMTNLVMAQ
DRLEVLDKLLQKAPKSPQRATPMEVDEAGPSRVTPSPQVRPKSGPLSPNVTVRQRRAAAT
TTTTRTTVIPKPSVIPRAQVTNKPMKMKQPIGGAVHKSNTLPRNYGNTRRGSGESSPRSS
PSNSPYSWRRGIPRQNSIPGANKNTPKKPKDIKNLNLKGVDKKLAETILNEVIDNGPAVS
FQDIAGQDTAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVANESN
ATFFNISASSLTSKWVGEGEKLVRAMFAVAKELQPSVVFMDEIDSVLCERKEGENDASRR
LKTEFLVQFDGVAGASDDKVLIMGATNRPQELDDAVLRRFTKRVYVTMPNKSTRLHLLKH
LLGKHSNSLTDREIDDLAKMTDGYSGSDLNALAKDAALGPIRELSLTEVKHVDASKVRQM
KLSDFTDSIKKIRKSVPPESLMKYMEWNSSYGDMNV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcaaaggacctggacggccctggggccgaaagcgagctgaaaacaaatccaaa
gccaagccaatagatcacggaggtttccatcgaagaaatttccgcataattgctgcccct
cttctctttatcttctcagttttacggactattgccttccaactgtgggttgttttgggt
ataattgcttgcaaaggcagtgctataagaggaatatcccaacaaagagcaggatatcgt
cctcaaagggatgcagaagtaggcatcagtatgtcgtcaaaggctcaaagaagtcctgga
cctgttgacccaatgattgccacccaaaagcatcatcacagaaaagcttttgagtacatc
tctaaggctttgaaaattgatgaagaagatggacgtaaagatgtggctgtagagttatac
aggaaaggtattgctgaactacagaagggcgtggctattgatattaagggacaaggagag
agttgggataaagcaagacgattacaggaaaagatgatgaccaatcttgttatggcacaa
gacagactagaggtgttagataaattattacaaaaggctcccaaatcaccccagagagca
acaccaatggaggtcgatgaagcaggaccatcgagagtaactccatcccctcaggtacga
ccaaagtctggtccgctatcccctaatgttacagttagacaaagacgtgcagcagcaaca
accaccacaaccagaacaactgtgatacctaaaccatctgtgatacctagagctcaagtt
acaaataagcctatgaagatgaagcagcctataggtggcgctgtacacaagagcaatact
ttaccccgtaactatggcaacaccagacggggaagtggggaatcctcacctcgtagctca
ccctcaaactctccatactcctggagacgtggcattcctaggcaaaattctatccctggg
gccaataaaaacactccaaagaagccaaaagacataaagaatttaaatctgaagggtgtg
gataagaaattagcagagactatactgaatgaagtgatagataatggaccagcagtcagt
tttcaggatatagctggacaagatacagcaaaacaagctctccaagagatagttatactg
cctgcacttagaccagagctgtttactggtttaagagcacctgcccgagggttattgctg
tttggtccccctggtaacgggaaaacaatgttggcaaaggcagttgctaatgaatctaac
gctacattcttcaatatcagtgcctctagtctaacatctaaatgggttggtgaaggtgag
aagctagtgagagctatgtttgcagttgctaaggaacttcaaccatctgttgtcttcatg
gatgagatagactctgtgttgtgtgagagaaaggaaggagaaaatgatgccagtcgtcga
ctcaaaactgaatttcttgtgcaatttgatggggtagcaggtgctagtgatgataaggtg
ctgattatgggagctacaaatagaccacaggaattagacgatgctgtactcagacggttt
actaaacgtgtgtatgtgacaatgccaaacaagtcgactagattacatttgctgaaacat
ttactgggtaaacatagtaacagtctcactgatagagaaattgatgatctagccaagatg
acagatggatattccggtagtgacttgaatgctttagcaaaagatgcagctcttggtcca
ataagagagctatcattaacagaagtgaaacatgtagatgcaagcaaggttcggcaaatg
aagctgtcagatttcacagactctataaagaaaatccgtaaaagtgtcccgccagaatct
ttaatgaaatatatggagtggaatagctcatatggggatatgaatgtctga
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