KEGG   Ruditapes philippinarum (Manila clam): 132735220
Entry
132735220         CDS       T09557                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein Rab-11B-like
  KO
K07904  Ras-related protein Rab-11A
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    132735220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rphi04131]
    132735220
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rphi04147]
    132735220
   04031 GTP-binding proteins [BR:rphi04031]
    132735220
Membrane trafficking [BR:rphi04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    132735220
Exosome [BR:rphi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   132735220
  Exosomal proteins of colorectal cancer cells
   132735220
GTP-binding proteins [BR:rphi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    132735220
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 AAA_14 AAA_16 ABC_tran DUF3289 TniB AAA_21 DUF3533 Csa3_N WWE_2
Other DBs
NCBI-GeneID: 132735220
NCBI-ProteinID: XP_060578143
LinkDB
Position
Unknown
AA seq 216 aa
MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSFXMDGKKS
KPPIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEAKAYAEKNTLSFIETSALDSTNVETAFQNILTEIYKIVSQKQ
IRDNPDDDNSPSNNVQTITVAPTDNNVTNKKSCCNV
NT seq 651 nt   +upstreamnt  +downstreamnt
atgggtactaaagatgatgaatacgactatctttttaaagttgtactgattggagacagt
ggtgtgggaaagtccaatcttttgtccagatttactagaaatgaattcaacttggaaagc
aagagtacaatcggggttgaatttgccacaaggagtttttaaatggacggtaaaaaatca
aagcccccgatatgggacacagctggccaagaacgatacagggctatcactagcgcgtat
tacagaggggctgttggtgcattgttagtctatgacattgctaaacatttaacatatgaa
aatgtagaaagatggttgaaagaattacgtgaccatgcagataataatattgtgataatg
ttggtgggcaacaagagtgatctacgacatttaagagccgtaccaacagatgaggcaaag
gcatatgcagagaagaacacactgtcatttattgaaacttctgcattagattccacaaat
gttgaaactgccttccaaaatatattaacagagatatacaaaatagtttcacaaaaacag
atacgggacaacccagatgatgataattcaccaagtaacaatgtacagacaattactgtt
gcaccgaccgataataatgtaacaaataaaaagtcatgttgcaacgtttga

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