Ruditapes philippinarum (Manila clam): 132735408
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Entry
132735408 CDS
T09557
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132735408
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
132735408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
DUF4062
AAA_16
EIF3I
NPHP3_N
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
ATPase_2
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_LRRK2
BBS2_Mid
WD40_MABP1-WDR62_1st
NACHT
AAA_22
APAF1_C
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EML
WDR90_beta-prop_4th
nSTAND1
Beta-prop_VPS8
Beta-prop_SCAP
AAA
YfmQ
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
ATP-synt_ab
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
132735408
NCBI-ProteinID:
XP_060578337
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MGSGSSKSPKPKSEPVTKPKPDTVSVKATANAASIPKQVDDSDDILKDKIKHDADEKGIA
STETGKSADKENEPEVFLTEVPEPWMDILNEVADCELWPENKRSERPEWRENLAKADELF
RAPKIPISLKTKTAVYNGDLVIPDLPEMNKKVLVFVSSTFTDTKAERNNLMKDVYPYVRE
VCRRLGLEFGTIDMRWGVTDEATKHHSTVKMCLDEIQRCVKESYGPAFLCILGHKYGYRP
IPATIDESEYEKILACLINNNHDTSLLKKFYHLDKNSIPPEYVLRSMSDDEDQTKWWQDI
EVIHEQIREAVAECFQNKPEIYDKYFVSVTEMEIQEGAFKNSKRDDQSYFMIRELKDIQN
RIHYNRRLRDMKGSEVDLDAYERLQCLIQKKLPENIREENRKTFIYESANAKGGMHYVSK
FCDHVCRTMVEMIFDNFQRKGNVEDNTDVMEIVQHLKLAGDKRTLFVGREKELMEINKYL
IDKSGNGKPLVISGSSGSGKTALMAVSAQKGKAISKNSVCVVRFIGTTSQSGSVRNLLLS
VCRQIAYAYGQDVGLVPDSTRELADYFRKSLSNATKTSPLIIHLDSLDQLSADDNGRKLD
WLKLDQDLPKHVKLILSSLEADTLYVLQKHVPEKNFINIIKLLPGEGPDILQKMMKVKGR
KVAESQLKVVMDAFLNTPLPLYLSLASDIACKWRSYDNIDANDISNTIKGMITLLFERLE
KMFGAIFVSHALAFITASKDGLSQNELEDVLSCDDKVLDTLFQYWTPPMRRIPPLLWLRV
RKELGQYLSERGSDGVTVFTWFHRQFKETAYERYLEKSNMNHNAHMALADYFDGKWTNGK
GYIAKGLQSNKDAKPVLKDRGIPKQPLTFGDGAVVNNINRRKIRELPYHLLKINDITRIT
EVFFNLEFILTKFTAGMGHEFYSELTEAAKISDDKNLIKMVRFIGANLSFLLREPSAVYQ
LASQQNKSHPARQQLELLKEPPLTILKNITDSNDSENDACELTLQGHEKSPLSCDFSPKG
DRIVSTSIDGCLRIWDVLTGSEIAVNTSLPSPMDMAKKDERDHVMNMRVHTANPCCFSRD
GKTIVVGTEDAEIVLFDSDGTKFKSEPTENDAVTCLQFSPDNTSVVAGYKNGNINVFIFK
SEITIRVKEPVGPLPNLILKLASVLGAL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggggtccggtagttccaagagtcctaaaccaaagtcagagcctgtcacaaaaccaaag
ccagacactgtatccgtaaaagcaacggcgaatgcagcgtccataccaaagcaggtcgat
gactctgatgatattttaaaagataaaataaaacatgacgccgacgagaaaggcattgct
tccacggaaacgggcaaatcagctgataaggaaaacgaaccggaagtgtttttaacagaa
gtaccagagccatggatggacattttaaatgaagttgctgactgtgaactatggcccgaa
aataaaaggagtgaaagaccagaatggcgggaaaatctagctaaagcagacgaactattt
cgagctccgaaaataccgatttctttaaaaaccaaaacagcggtctacaatggtgatcta
gtcattccggatttaccggaaatgaataagaaggttctcgtgtttgtgagttcaacgttt
acagatacaaaagccgaaagaaataatctaatgaaagacgtatacccatatgtgagagag
gtttgcagacgacttggtttagagtttggtaccattgacatgcgatggggcgtcaccgac
gaggccacaaagcatcattctacagtgaaaatgtgtctagatgaaatacaaagatgtgta
aaggaaagttatgggccagcgtttctttgcattctcggtcataaatatggatacagacca
attcctgcgacaatagatgaatccgaatatgagaaaattcttgcttgcttgattaacaac
aatcacgacacaagtttattgaaaaaattctatcatcttgataaaaattctattcccccg
gaatatgttctccgatctatgagcgatgatgaagaccaaaccaaatggtggcaagatatt
gaagttatccacgagcaaatccgtgaagcagttgccgaatgtttccagaacaaaccggag
atttacgacaaatatttcgtatcagttacagaaatggaaattcaagaaggtgcatttaaa
aattcgaaacgagacgatcaatcatatttcatgatcagagaacttaaagatatacaaaac
agaatacactataatcgtcgattgagagacatgaaaggttcggaagtagatttagatgcg
tatgaaaggcttcagtgtctgatacaaaagaaacttccggaaaatatacgggaagaaaac
agaaaaacgtttatttacgaatctgcaaacgctaaaggcggaatgcattatgtgagtaaa
ttttgtgatcacgtgtgtcgcacaatggtggagatgatttttgataactttcagagaaaa
ggtaatgtagaggacaacacagatgtgatggaaatcgttcagcatttaaagttagcaggc
gacaaaagaacactttttgtaggacgtgaaaaagaactaatggagataaacaaatacctc
atagacaaatcgggtaacggcaagccccttgttatcagcggaagttccggaagcggtaaa
acggcattgatggctgtaagcgcccagaagggaaaggccatttctaaaaatagcgtatgc
gttgttcgattcatcggaacaacaagtcaatcgggatctgttagaaatctgcttttaagc
gtttgtagacaaatcgcttatgcctacggtcaagatgttggattagttcctgattctacc
agggaattggcagattattttagaaaatctcttagcaatgctacaaagacctcaccttta
atcattcacttggattccctcgatcaattatccgcagacgacaatggtaggaaacttgat
tggctaaaacttgaccaggacttaccgaaacatgtaaaactaattctctcctcattagaa
gcagacactctttatgttcttcaaaagcacgtgccggaaaagaatttcattaatattatt
aaactattacccggtgaaggacctgatatccttcagaaaatgatgaaggtcaaaggtcga
aaggttgccgagtctcaattaaaagtagtcatggatgcttttctgaatactccacttcca
ttgtacttgagtctcgcatctgatattgcatgtaaatggaggtcttatgacaatatagac
gcaaacgatatttcaaataccattaaaggcatgataacattactttttgaacgcctggag
aaaatgtttggcgccatatttgtcagtcatgcgttggcgttcatcacagcttcaaaagat
ggattgtcacagaacgagcttgaagatgttttatcatgtgatgacaaagtattggacacc
ttgtttcaatattggactccacctatgcgtcgaataccaccacttctttggttgcgggta
cgcaaagaattaggtcagtacctttcagaacgaggctctgatggcgtgacagttttcact
tggtttcatagacaattcaaggagacggcatatgaaaggtatttggaaaagtcaaacatg
aaccacaacgctcacatggctttggcagattacttcgatggtaaatggaccaatggcaag
ggatatattgcaaaaggtttacaatcgaataaagatgcaaaacctgttttgaaagacagg
ggaatacccaaacaacctttgacatttggcgatggagctgtagtcaacaatataaataga
aggaaaataagggagctgccatatcatcttttaaaaatcaatgatataacacggattact
gaggttttcttcaatcttgaattcatcttaacaaaatttacagctggaatgggccacgaa
ttttactccgaactcacagaggcagctaaaatttctgatgacaagaaccttataaaaatg
gtgcgattcattggtgcaaacctgtcattcttactgagagaaccatctgccgtttatcag
cttgcatcgcaacagaacaagtctcacccggctagacaacagctagagcttctcaaagag
cctccattgaccatacttaaaaacatcacagattccaatgactcggaaaatgacgcatgc
gaactaacattacaagggcatgaaaaaagtccactgtcttgcgatttttcaccaaaagga
gacaggatcgtgtcaacttctattgatggatgtctaagaatatgggacgtcctaacaggt
tcagaaatagctgtgaacacgtcacttccgtctccaatggatatggctaaaaaggacgaa
agagatcacgtgatgaatatgcgggtacatacagccaacccatgttgtttttcacgggac
gggaaaacaattgttgttgggacagaagacgctgaaattgtcctatttgattctgatgga
acaaagtttaagagtgaaccgacagaaaatgacgcggtgacatgcctgcagttctcccct
gacaatacgtccgtagtagctggctacaagaacgggaatataaacgtgttcatattcaaa
tctgaaattactatacgcgtcaaagaacctgtgggaccgcttcccaaccttatattaaaa
ttggcaagtgttttgggagccttatga
DBGET
integrated database retrieval system
