Ruditapes philippinarum (Manila clam): 132735452
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Entry
132735452 CDS
T09557
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132735452
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132735452
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132735452
03036 Chromosome and associated proteins [BR:
rphi03036
]
132735452
Peptidases and inhibitors [BR:
rphi01002
]
Metallo peptidases
Family M1
132735452
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132735452
Coactivators
SAGA/TFTC/STAGA complex
132735452
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132735452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
TriTu
SR-25
Motif
Other DBs
NCBI-GeneID:
132735452
NCBI-ProteinID:
XP_060578386
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MVKDKIVETLKAYKLAHQVLCVKAFNFHGKSLIGYVELTIYPLRADLKRIKINSKQCRIY
RVLVNDTWESQFWYNDPTLEAVQDEEKARQCSLEAYEKCYNAAVKSTNPDLGNGEVTIRI
PQECLPLIAEMRPFRINIEFSLEQPEGGLHFVLPNIDGTLAERGAHCFTYRHENSSRLWF
PCIDSYAEPCTWKLEFTCDLDMTAVSCGDLLEVIYTTDKRAKTFHYYLSTPTSAPNIALA
VGPFEILVDPNMHEVTHFCLPHLKGILKHTTSYLHESFEFYEELMSSRYPFSCYKQVFVD
ESYEDMQSFSTMTIFSTNLLHSARIIEQTIITRKFMASGIAHQFFGCFIVMQCWFDAWLT
KGIAAYLTQLFVKKTFGNNEYRHGIAQYLKEVQEYEGQCGGIVLDPSTGQNNQYFSCFQP
HTMSPTYLDMYNKKSMLILRMLEARIGATLLLQVLNKLQALAYTASQQKFVSNSWSNMLL
STNSFLKIISTVTGKDIQPFIDQWIYQSGCARFIGNFVFNRKRNVVELEIKQDHTAKGSL
KYVGPLEVTIQELDGSFNHTFNIEENKTKFEITCHSKSRRNKKKKIPLMTGEEVDMDLSA
MDADSPVLWLRVDKDMNLLRSVQWEQPDYMWQYQLKYERDVVAQSEAIQALRLFATPATR
KALTDVLECEQSYYKVRIESSMCLAKVANTMVTSWAGPPAMLNIFRKMFGSHSCPSIVRQ
NNFSNFQQYFILKAIPMAMAQLRNMHNICPPEVVRFLLDLFKYNDNSKNKYSDNYYRAAL
VDALAATVTPAVTTVTITGQSVNSDLSSDTKAILDEITRCLNVEKLLSCYRHTVTVRKGG
KTRETISDVNVSELYWLLEVVEKDPDIYVSYETIQMLSNNPPFKRGEDSLLNTEALVNRL
WKLINCTLSHDAKLRCGVADFYFAMFGRYRPACLHVPDSFIVFNMNEKKKPAMINPAIVS
EQMTDMFEEDEDDLPSMISTHVPTPVIPKDESIIVDVESNSPIKEPIRPMIEKPTSIPAF
MGMHSRSESPQAPLFPQGIKRRAESPPPAPPPKLPTLVKQESASGEDSNSFKLKIKLGNR
NSVEDRNQYISQPSVTMVTNSELLPPVLYPEFLRFARIPEEPSQTSRPTKSEIPNLSVLG
GDSQSRLSEDSNSSQEDSSLSRPVPLTGKTEGPTSFHGIFSSSSSTVPTVSDSVTIATTE
TDPNKHHKLKKKKKKNKHKHKHKHKHDRHEKDRTRDSKDRFSVTGVSSPMVPSVQSVTSM
SSIDNTRDSAPSSPEFEVI
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagacaaaatcgttgaaacgcttaaagcgtataaacttgctcatcaagtgctt
tgtgtcaaagctttcaattttcatgggaaatcactcataggttatgttgaactgacaata
tatccacttcgtgctgatttaaagaggatcaaaatcaacagtaaacagtgccggatatat
agagtattagttaatgatacatgggagtcacagttctggtataatgatcctaccctagag
gctgtacaagatgaagaaaaggccagacagtgtagtttggaagcatatgagaagtgttat
aatgctgctgtaaagtcaactaaccctgatcttggtaatggtgaagttacaatacgtata
ccacaggaatgcttacctcttattgctgagatgaggccattcaggataaatatagaattt
tccctggagcagccagaaggtggtttacattttgttttaccaaatatagatggtacacta
gcagagagaggggctcattgttttacatatagacatgaaaatagttcaaggttgtggttc
ccttgtatagacagttatgcggagccctgcacatggaagctggagtttacctgtgacctt
gacatgacagcagtgtcatgtggtgaccttttagaggtcatatatacaacagataagagg
gcaaaaacatttcattattatctgagtactccaacatcagctcctaatatagctctagct
gtaggaccatttgagattctggttgacccaaacatgcatgaagttacacatttctgttta
cctcatttaaaaggtatcctcaaacataccaccagttacctacatgagagttttgagttt
tatgaagagttgatgtctagtcgttatccattctcgtgttataaacaagtttttgttgat
gagagctatgaagatatgcagtcattctcaactatgacaatattcagtacaaatttacta
cactctgcacggatcattgagcagacaataataacgaggaagtttatggcgtctggtata
gctcaccagttctttggttgttttattgtgatgcagtgctggtttgatgcctggttaact
aaaggtatagctgcatacctaacacaattgtttgtgaagaaaacatttggtaacaatgaa
tacagacatggtattgctcagtatttgaaggaggtacaggagtatgaaggtcagtgtggg
ggtattgtattagatccatctacaggtcagaacaaccaatatttctcttgtttccaacca
cacacaatgtcacctacatatctagatatgtacaacaagaaatctatgcttatattacgt
atgttagaggcaagaattggagcaacacttttactacaggtattgaacaagttacaagca
ctggcatatacagcgtcacaacagaagtttgtttctaattcctggtcaaatatgctgctg
tctacaaactcttttttgaagataatttccactgtaacaggaaaagatattcaacctttt
atagaccaatggatatatcaaagtggatgtgccaggtttattggaaattttgtcttcaac
aggaagagaaatgttgtagaacttgaaataaaacaagaccatacagctaaaggttccctc
aaatatgtgggacctctagaggtgaccatacaagaattagatggctcattcaatcataca
tttaacatagaagagaacaagacaaaatttgaaataacttgtcattctaaaagtagaagg
aataagaagaagaagattccattaatgactggagaggaggttgatatggatcttagtgcc
atggatgctgactcaccggtattatggttacgtgtagataaagatatgaacttgttacgt
agtgtacagtgggaacagccagattatatgtggcaatatcagctgaaatatgagagagat
gtagtagctcagagtgaggcaatccaagcattacgactgtttgctacaccagctacaaga
aaagctttgacggatgtattggagtgtgaacagagttattataaagtgaggatagaatcc
agtatgtgtctagctaaggtagctaacacaatggttacatcctgggctggtccaccagct
atgttgaacatattcaggaaaatgtttggctcacactcttgtcctagcattgttagacag
aataacttcagcaacttccagcaatattttatactgaaggcaatccccatggcgatggca
cagttaagaaacatgcacaacatctgtccaccagaggttgttagatttctactggatctt
ttcaaatataatgacaacagtaaaaataagtattcagacaattactatagagcagcatta
gttgatgccctggcagctacagtaacacctgctgtaaccacggttaccattactggtcaa
agtgttaattctgacttatcatcggacactaaggctatattagatgagataacacgatgt
ctgaatgtggagaaattactgtcatgttacaggcatactgtcactgtcaggaaaggcggt
aaaaccagagaaacaatctctgatgtgaatgtgtcagaactgtactggttactggaagtg
gttgaaaaagacccagacatatatgtcagttatgagacaatacaaatgttaagtaataac
ccaccatttaaaagaggagaggacagtctactgaacactgaagctcttgttaacagactc
tggaaacttatcaattgtacattgtcacatgatgccaagttacgatgtggagttgctgat
ttttacttcgctatgtttggacgatacagaccagcctgtctacatgttccagatagtttt
attgtgttcaacatgaacgagaagaagaaacctgccatgataaatccggccatagtatca
gaacaaatgactgatatgtttgaggaggatgaggacgacttgccatctatgatctcaaca
catgtgcctacacctgtaatacccaaagatgagtcaattattgtggatgtagaaagtaac
agccctataaaggaacctatcagacctatgatagagaaacctaccagtataccagccttc
atgggtatgcacagtaggtccgaatctcctcaggcaccattgttcccccagggtattaaa
cgtagggcagagtccccacctcctgctcccccaccaaaacttcccacactggttaaacag
gagagtgctagtggggaggacagcaattcattcaagctgaaaattaagcttgggaaccgt
aacagcgtggaggacaggaaccagtacatctcacaaccatctgtaaccatggtaactaac
agtgaactactaccaccagtattatacccagaattccttagatttgcacggataccagag
gagccaagccagacatctagaccaaccaagtcggagattccaaacttatcagtactgggt
ggagacagccagagccggctaagtgaagactcgaactcctcacaggaagattcctccttg
tctagaccagtaccacttacaggaaagacagagggaccaacatcatttcatggtatattt
tcatctagcagtagtactgtacctactgtatcagactcggttaccatagcaactacagaa
actgaccctaataaacatcataaactgaaaaagaagaagaagaaaaacaagcataaacac
aagcacaaacataaacatgacagacatgagaaggatcgaacccgggacagtaaggacaga
tttagtgtgactggggtgtccagtcccatggtgccatctgtacagtctgtgacctctatg
tcatctatagataataccagagactcagcacctagttccccggagtttgaagttatttga
DBGET
integrated database retrieval system
