Ruditapes philippinarum (Manila clam): 132735493
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Entry
132735493 CDS
T09557
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132735493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132735493
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132735493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WDR55
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
132735493
NCBI-ProteinID:
XP_060578437
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MMTIKKLKGPPRSTCLFQRCSNDVGKACIGPKGSYCVMVNKKEMIVKNLPKNKPVKHRID
RKQEFTCVAGNPNGQCIATGCNDGKIFLWYNFLSEDRAVKTVLHWHSLALRELCYTQDGS
YLLSGGHECVLVKWHPESSYKDYMPRLGAPLNHIVCSPNNLLYATCLNDNVIQLVTSNFD
IQNVYQGLTRSPHVSNTSNPFPAGVTYDPRSEALVLNGKPGHIQFYSVQEDKQLYNLDIV
CQNYISPENLNTPLEVTEVIQASFDSNGEWLATIEYWNDGVMTPEMRLKFWQFNTEKQSF
VLNTSVEMPHEDTVHSLVFRPVSSTSTPGMQHMAVTSSSDGKFKIWALVDDTDIYRSNRK
WTCESVGFYRNLPAGKAAFSEDGSLLAVLFGSCITVWNPENNLFKVALHNTMLQDTVKHV
VFGNHGSSHCLVSTTEKTLTVWSLISCSVLWSASTQIVCLTKDPLTDIVAAFTSSRDLFV
FRPIDPTPLFSHAEVSDSTILSAAFVPHSKKSLYEKTTLSWQSQSELYFLNKDQELLAVS
METDRKLAKKKEDVVSFEQNLPQSALSLLMSHHSNKLRPHSSLNKVARQPDGKFMKEMFS
SAPHVQPSVTTLCQPFIQSLMILSEERRKQGQNDSDDDDLSEEEDDIRPYQTVSLDSGLE
SDMEVDTVDTQSVEVINNSKLQTESDSDENEAAVLIKKKTKNKLRNETTVTAICEKLDKV
KMFEEKVTDEDLQEIFTQDYSWFSSSSKT
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgatgactattaagaaattgaaagggccacccagaagtacatgtttatttcaaagatgt
tcaaacgatgtaggaaaagcttgcattggtccaaagggttcatattgtgtgatggtgaac
aaaaaggagatgattgtaaagaatttgccaaaaaacaagcctgtaaaacatagaatagac
agaaagcaggagttcacatgtgtggcaggtaatcccaatggtcagtgtatagccactggc
tgtaatgatggcaaaatatttctttggtataactttctgtctgaagatcgagcagttaaa
actgtacttcattggcattcattggcattaagggaattgtgttacacgcaagatggttcg
taccttctgagtggaggtcacgagtgcgtgctagtgaaatggcatcccgagtcctcgtac
aaggactacatgccgaggcttggtgctcctctcaaccatattgtctgctccccaaataat
cttctatatgctacatgcctaaatgataatgtcatccagcttgtgacaagtaattttgac
attcagaatgtctatcagggactgaccaggagccctcatgtaagcaacacgtcaaaccca
ttcccagcaggtgtgacctatgacccgcgatcagaagccctggtactcaatggaaagcct
ggacacatacaattctattcagtgcaagaggacaaacaactatataatctagacattgtg
tgtcagaattatatttcgccagagaatctaaacacacctttggaagtaactgaggttata
caggccagctttgatagcaatggagagtggctagcaaccatagaatactggaatgatggg
gtcatgacccctgagatgaggttaaaattctggcagtttaatacagagaaacagagtttt
gttctaaatacgtctgtggaaatgccgcatgaagatacagtgcactccctcgtattcagg
cctgtttcctccacgtcaacaccaggcatgcagcatatggcagtcacatccagcagtgac
ggaaaattcaaaatctgggctttggttgatgacactgacatatacagaagcaataggaaa
tggacctgcgagtcagttgggttttaccggaacttgccagctgggaaagcagcgttttct
gaggatggttccctgcttgctgtgttgtttggttcctgtataacagtttggaatccagaa
aataatctattcaaagtggcgttacataatacaatgctccaagacactgtcaaacatgtt
gtatttgggaaccatggaagcagtcactgtctagttagtacaacagagaaaactctgaca
gtctggagtcttatatcttgctcagtgttatggagtgcatcaacacagatagtttgtctg
acaaaggacccgttaacagacattgtggctgccttcacatcatcaagggatttgtttgtg
tttagacccattgatccaacacctctcttctcccatgctgaagttagtgatagtaccata
ctcagtgcagcatttgtacctcactcaaagaagagcttgtatgaaaagacaactctgtca
tggcagtcacaatcagagttatatttcttgaacaaagaccaagaacttttggcagtgtcc
atggaaacagatagaaaattggcaaagaagaaggaagatgttgtttcatttgagcagaac
ttgccacagtcagcccttagtttattgatgtcgcaccatagcaacaagcttagaccacat
tcttcattaaacaaagttgctaggcaaccagacggaaaatttatgaaagagatgttcagt
tcagcaccacatgttcaaccatcagtgaccactctatgtcaaccatttattcagtctctg
atgatactttcagaagaaagacgtaaacaaggacaaaatgacagtgatgatgatgactta
tcagaagaggaagatgatattagaccctatcagactgtgtctctagattctggtctggaa
tctgatatggaagttgacacagttgatacacagtctgttgaagttataaataacagcaaa
ttacagactgaaagtgactctgatgaaaatgaggcagcagttttaataaagaaaaagaca
aaaaataaattgagaaacgaaacaactgtaacagcaatttgtgaaaaattggacaaagta
aaaatgtttgaagaaaaagtgactgatgaagatcttcaagaaatatttactcaagattac
agttggttttcctcttcatctaaaacataa
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