Ruditapes philippinarum (Manila clam): 132735848
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Entry
132735848 CDS
T09557
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04130
SNARE interactions in vesicular transport
rphi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
132735848
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132735848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132735848
Membrane trafficking [BR:
rphi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
132735848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
132735848
NCBI-ProteinID:
XP_060578846
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MKLYSLSILYRVGDGKANRLVSAYELSSFGFFQRSSVKEFMNFSTKILVERTSPSCRSSV
KEQEYVCHVYVKSNNVGAVVIADHEYPQRVAHTLLNKAIEDFEAKVDKKLWSIAKEDEIK
YPELEQFLQKYQNPREADAMSKINADLDETKIILHNTIEAVLERGEKIDDLVEKSEGLSL
QSKTFYKTARKTNSCCVIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtattctctatctatactttatagagttggggatggaaaggcaaaccggctt
gtatcagcatatgaactatcatcatttggattctttcaaagatcaagtgtgaaagaattt
atgaatttctctacaaagattttggtggaacgaacatctccctcttgcagatcttcagtc
aaagaacaagaatatgtgtgtcatgtatatgtaaaaagtaacaacgtaggggcagtggtt
atagccgatcatgaatatcctcagagagtggctcatacattactaaataaagccatagaa
gattttgaagctaaagtggataaaaaattatggtctatagccaaagaagatgagattaaa
tatccagagctggaacaatttttacagaagtatcagaatccaagagaagctgatgccatg
tcaaagattaatgcagatcttgatgaaacaaaaattattttacataatacaatagaagct
gtattagaaagaggggagaagatcgatgatttggtggagaaatccgaaggcctaagttta
cagagtaaaacattctataaaactgccagaaagacaaactcatgctgtgttatactataa
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