Ruditapes philippinarum (Manila clam): 132735870
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Entry
132735870 CDS
T09557
Name
(RefSeq) RNA-binding protein FXR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132735870
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132735870
Factors involved in mRNA localization
Other mRNA localization factors
132735870
mRNA cycle factors
Stress granule specific factors
132735870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
FXMRP1_C_core
KH-I_KHDC4-BBP
SH3_1
Motif
Other DBs
NCBI-GeneID:
132735870
NCBI-ProteinID:
XP_060578867
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MEELAVEIRGSNGAFYKGYIKNIHDEEVTVAFENDWQPPRTVKLTEVRPTPNKLTDKQEY
KEGDQIEVLAKTQDDEALGWWMAKIKMFRGEFAVVEYVGWDKTYSDIVPMERLRPINDLC
PITKDSFFKHVIEIPPDLHEICADEQSHVEFKKHVGGSCILFSAEQSALIILSTSSTVIH
RASMMGDMHIRNLRQKSLLRQRTEEAVKKLQELNMYIQSTKIKSGHVEEFSVEESLMGLA
IGTHGANIMQARRIEGVTGIELNESTCTFKVHGESEDACKKARAMLEYAEDTFQVPRDLV
AKVIGKNGKNIQDIVDKSGVVRVKIEGDNERDAPREDGQVPFVFVGTVENINNAKLLLDY
NLDSLREVERLRQEKLEIDQQLRTLAGPQSGPYFPGPRERRDSNDPYSSDREHDRRGGYR
GGRGRGRGRGMRRFNDRFTDDAEMHVGVGDWNNEVVKEERRQSGYLTDSILSRGGRGGYR
SRGRPRIPRGRGGYSSNRNSDYDGWSHYPPRHTRDTSYRTSYDTDDRYDRTDRSRRRMTD
DDDTVLDNASVNSQDQDYSDSRSGTERRRRRRRMRPGRGNSSAASGTETDTSVSNYPRGA
SSNRGKGANSRNDARNESPVPSPKAANGESQNESAPKEQRDSRRGGFNNRPPMRNGNGGA
PRNSQQNAGDAENKGGKVSHETLPPSGAGKEQMVNGQN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactagcggtcgaaatacgagggagtaacggtgctttttacaagggatatata
aagaatattcatgatgaagaagttactgttgcttttgaaaatgattggcagccccctagg
acagtcaagttaactgaagttcgtccaacaccaaataaactcacagataaacaagaatat
aaggaaggagaccaaattgaggttttagcaaagacacaagatgatgaggcattgggttgg
tggatggcgaagattaagatgttccgtggagagtttgcagtggtggaatatgttggctgg
gataaaacatactctgatattgtacctatggaaagattacggcccataaatgatttatgt
cctataaccaaagatagtttctttaaacatgtaatagaaattccacctgatttacatgaa
atatgtgcagatgaacaatcccacgttgagtttaagaaacatgttggtgggtcgtgtatt
ttatttagtgccgaacaatcagctttgattattttatcaaccagttctactgtgatacat
agagcttccatgatgggagatatgcatattagaaatttacgtcaaaaaagtctgttacga
cagcgaacagaagaagctgtaaaaaaattacaggagttgaacatgtacattcagagtaca
aagataaagagtggtcatgtggaagagtttagtgtggaggaatcattgatggggctggct
ataggcacgcatggggctaatattatgcaagcacggagaattgagggtgtaacaggaata
gaacttaatgaaagtacatgtacatttaaagtacatggagagtctgaggatgcgtgtaag
aaagctcgtgccatgttagaatatgctgaagatacatttcaagttccgagggaccttgta
gctaaggtgataggaaagaatgggaagaacattcaagatattgtagataaatctggtgta
gtgagagtaaagattgaaggtgataatgagagagatgctcccagagaggacggtcaagtg
ccatttgtgtttgtgggaactgttgaaaatataaataatgctaaattactactggattat
aatctggacagtttaagggaagttgaaaggttacggcaagaaaaattagagatagatcaa
cagctacgtaccctagcagggcctcaatctggaccttacttccctggtccaagagaaaga
agggacagcaatgacccatattccagtgacagagaacatgacaggaggggaggttacaga
gggggtaggggtcgtgggcgaggtcgaggaatgagaagattcaacgatagatttacagat
gatgcagagatgcacgttggagttggtgattggaacaatgaggttgtgaaagaagaacgt
agacagtctggttatcttaccgacagtattcttagtcgcggaggtcgtggtgggtacaga
agccgaggccgacctcgaattccaagaggtcgtgggggttattcatctaatagaaattca
gattacgacggctggtctcattatccacctagacatactagagataccagttatagaacg
tcatatgacacagatgatcgttatgatcgtacagatagatcccgtcgtcgtatgacagat
gatgatgacaccgtcctagataatgctagcgtcaatagtcaagatcaagactacagtgac
agtcggtctggtacggagcgtcgccgtagaagaagacgtatgagaccaggcagaggtaac
agtagtgcagcttccggtactgagaccgacacaagtgtatctaattatccccgtggtgct
tcatctaaccgtggtaaaggagctaattctaggaatgatgcacgaaacgaatctccagtc
cccagtcctaaggcggccaacggtgaaagtcaaaatgagtcggcacccaaggaacagcga
gactctagaaggggtggattcaataacagacctccaatgaggaatggtaatggaggagca
cctaggaattcccagcagaatgctggagatgcagagaataaaggggggaaagtcagccat
gaaacgttaccaccttctggagctggtaaagagcagatggtcaacggacaaaattga
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