KEGG   Ruditapes philippinarum (Manila clam): 132735886
Entry
132735886         CDS       T09557                                 
Name
(RefSeq) F-box only protein 42-like
  KO
K10317  F-box protein 42
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132735886
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     132735886
SSDB
Motif
Pfam: Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_ATRN-LZTR1 Kelch_4 Kelch_3 Kelch_1 Kelch_6 Kelch_2 Kelch_5 NANM F-box-like F-box F-box_5
Other DBs
NCBI-GeneID: 132735886
NCBI-ProteinID: XP_060578896
LinkDB
Position
Unknown
AA seq 601 aa
MDEIDETGEYISNKTIHDLPEEILEFILMKVSPYRDLKSASLVCTAWNKLIKVVKRKLHQ
IFLQSVYTSKIDWSCIQPEPVAHITERYSHSCCYHDKSLYVFGGCTSTNTTLNDLWRFDL
STREWIRPLAMGTYPYPKACASLVVYKDNLVLFGGWSHPTPFPLHQAARFFSELHIYKPS
TNRWSHVTTLSHQSPQPIAGHSASVIGDSMVIFGGSQIPGIRTNEVWLFDFNEQVWKMPK
IGYRRPMPRYGQTQVTLDDSHILIVGGCGGGIPNQVYNDCWLLTVGEDEWRWDLIIVENP
QWAAPQLWCNSACKVDNMIVTLSKAAKPPPRTVPVSPRTYKPVGKIWVPPRENVVDTNTM
PTNHSEEYASNATMSTNQSQPSESPDFMQANQSHTSGIETTNQRAHNAVPANQNGKNCGF
EKVDQSSLSAHSASHQPDFRSPEAGTSNPRPGQPSVRPNAMKNRQKQLEALLKYEKRFRH
TDMVGPSDGDNEPPRLSQNLHNIRQQKTPVSTNLASLMVPHVLDISQVLECKKVTWQKLN
FENLTGAPTGTIFYSLVEGQNEILMFGGIEKDIHALQRGQGIQSHTVNNLLYVISPIHHL
H
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggatgaaattgacgagacaggcgaatatatatcaaataagactatacatgatctacca
gaagaaatattagaattcatcttgatgaaggtgtctccatacagagacttgaaatcagca
agtttagtctgtactgcctggaacaaacttattaaagttgttaagaggaaacttcatcaa
atatttctacaaagtgtttatacatccaaaattgactggtcatgcattcaaccagaacct
gtggcacatatcacagaacgctattctcacagttgctgctaccatgataaatctctgtac
gtttttggaggctgtacatctactaacaccacattaaatgatctatggaggtttgatctg
tcaactagagaatggataaggcccttggcaatggggacatatccctatcctaaagcatgt
gccagtttggtagtatataaagataacttagttctatttggaggctggagtcatcctaca
ccattcccattgcatcaggcagcaagatttttctcagaacttcatatttacaaaccatca
acaaaccggtggtcccatgtaacaacattatcacaccagagtcctcaacctattgccgga
cattccgcatcagttattggtgatagtatggtgatatttggaggatcacagattcctggt
ataagaacaaatgaagtgtggttgtttgattttaatgagcaagtttggaaaatgccgaag
atagggtataggaggccaatgcctagatacggacagacgcaggtaacattggatgacagt
catattctgatagttggaggatgtggaggtggcatacctaatcaggtttacaatgattgt
tggttgttgactgtaggggaagatgagtggaggtgggatttaattattgtagaaaacccc
cagtgggctgctccccagctttggtgtaacagtgcttgcaaggtagataacatgattgtt
acgttgagcaaagccgctaagccaccaccaagaactgttccagtgagtccaaggacatac
aaaccagtgggtaaaatatgggtgcctcctagagaaaatgtagttgacacaaacacaatg
ccaaccaatcacagtgaagaatatgcatccaatgcaacaatgtcaacaaatcagagccaa
ccatctgaatcacctgatttcatgcaggccaatcagagtcatacatctggaatagaaaca
accaatcaaagggcacataatgctgtaccagccaatcagaatggaaaaaattgtggtttt
gaaaaagttgaccaatctagtttgtcagctcatagtgcaagtcatcaaccagattttaga
agtcctgaagctggaacatccaatcctagaccaggccaaccaagtgtaagacctaatgct
atgaaaaatagacaaaaacagctggaagcgttattgaagtatgagaagagatttcgccat
actgatatggtggggccgtctgatggtgacaatgaaccccctagactttcgcaaaatctt
cacaatatcaggcaacagaaaacaccagtttctacaaatttggcctcactgatggtcccc
catgtattagatatttcacaagttttggaatgtaaaaaagttacatggcagaaattgaac
tttgaaaacttgactggagcaccgactgggactatattctactctttagttgaaggtcag
aatgaaattttgatgtttggaggcattgagaaggacatacatgctttacaaaggggtcag
gggatccaatcacatactgtgaacaatttactatatgttatttcccccatacatcatctt
cattga

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