Ruditapes philippinarum (Manila clam): 132735886
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Entry
132735886 CDS
T09557
Name
(RefSeq) F-box only protein 42-like
KO
K10317
F-box protein 42
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132735886
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132735886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_1
Kelch_6
Kelch_2
Kelch_5
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
132735886
NCBI-ProteinID:
XP_060578896
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDEIDETGEYISNKTIHDLPEEILEFILMKVSPYRDLKSASLVCTAWNKLIKVVKRKLHQ
IFLQSVYTSKIDWSCIQPEPVAHITERYSHSCCYHDKSLYVFGGCTSTNTTLNDLWRFDL
STREWIRPLAMGTYPYPKACASLVVYKDNLVLFGGWSHPTPFPLHQAARFFSELHIYKPS
TNRWSHVTTLSHQSPQPIAGHSASVIGDSMVIFGGSQIPGIRTNEVWLFDFNEQVWKMPK
IGYRRPMPRYGQTQVTLDDSHILIVGGCGGGIPNQVYNDCWLLTVGEDEWRWDLIIVENP
QWAAPQLWCNSACKVDNMIVTLSKAAKPPPRTVPVSPRTYKPVGKIWVPPRENVVDTNTM
PTNHSEEYASNATMSTNQSQPSESPDFMQANQSHTSGIETTNQRAHNAVPANQNGKNCGF
EKVDQSSLSAHSASHQPDFRSPEAGTSNPRPGQPSVRPNAMKNRQKQLEALLKYEKRFRH
TDMVGPSDGDNEPPRLSQNLHNIRQQKTPVSTNLASLMVPHVLDISQVLECKKVTWQKLN
FENLTGAPTGTIFYSLVEGQNEILMFGGIEKDIHALQRGQGIQSHTVNNLLYVISPIHHL
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaattgacgagacaggcgaatatatatcaaataagactatacatgatctacca
gaagaaatattagaattcatcttgatgaaggtgtctccatacagagacttgaaatcagca
agtttagtctgtactgcctggaacaaacttattaaagttgttaagaggaaacttcatcaa
atatttctacaaagtgtttatacatccaaaattgactggtcatgcattcaaccagaacct
gtggcacatatcacagaacgctattctcacagttgctgctaccatgataaatctctgtac
gtttttggaggctgtacatctactaacaccacattaaatgatctatggaggtttgatctg
tcaactagagaatggataaggcccttggcaatggggacatatccctatcctaaagcatgt
gccagtttggtagtatataaagataacttagttctatttggaggctggagtcatcctaca
ccattcccattgcatcaggcagcaagatttttctcagaacttcatatttacaaaccatca
acaaaccggtggtcccatgtaacaacattatcacaccagagtcctcaacctattgccgga
cattccgcatcagttattggtgatagtatggtgatatttggaggatcacagattcctggt
ataagaacaaatgaagtgtggttgtttgattttaatgagcaagtttggaaaatgccgaag
atagggtataggaggccaatgcctagatacggacagacgcaggtaacattggatgacagt
catattctgatagttggaggatgtggaggtggcatacctaatcaggtttacaatgattgt
tggttgttgactgtaggggaagatgagtggaggtgggatttaattattgtagaaaacccc
cagtgggctgctccccagctttggtgtaacagtgcttgcaaggtagataacatgattgtt
acgttgagcaaagccgctaagccaccaccaagaactgttccagtgagtccaaggacatac
aaaccagtgggtaaaatatgggtgcctcctagagaaaatgtagttgacacaaacacaatg
ccaaccaatcacagtgaagaatatgcatccaatgcaacaatgtcaacaaatcagagccaa
ccatctgaatcacctgatttcatgcaggccaatcagagtcatacatctggaatagaaaca
accaatcaaagggcacataatgctgtaccagccaatcagaatggaaaaaattgtggtttt
gaaaaagttgaccaatctagtttgtcagctcatagtgcaagtcatcaaccagattttaga
agtcctgaagctggaacatccaatcctagaccaggccaaccaagtgtaagacctaatgct
atgaaaaatagacaaaaacagctggaagcgttattgaagtatgagaagagatttcgccat
actgatatggtggggccgtctgatggtgacaatgaaccccctagactttcgcaaaatctt
cacaatatcaggcaacagaaaacaccagtttctacaaatttggcctcactgatggtcccc
catgtattagatatttcacaagttttggaatgtaaaaaagttacatggcagaaattgaac
tttgaaaacttgactggagcaccgactgggactatattctactctttagttgaaggtcag
aatgaaattttgatgtttggaggcattgagaaggacatacatgctttacaaaggggtcag
gggatccaatcacatactgtgaacaatttactatatgttatttcccccatacatcatctt
cattga
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