Ruditapes philippinarum (Manila clam): 132735934
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Entry
132735934 CDS
T09557
Name
(RefSeq) target of EGR1 protein 1-like
KO
K13202
target of EGR1 protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132735934
Spliceosome [BR:
rphi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132735934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
132735934
NCBI-ProteinID:
XP_060578955
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSNFGRVPVIDVHSENLREVWPSMILALSNATFVGLDTELSGLGHRKKLGAKSVEDRYKN
ICETAKSRSILSLGVSCFQQMSAPSNTNQSESNCLSSSQSGSRYIVQTFNIMLLCEEEFM
VEPQSLRFLVQHGFDFNKQYEKGVPYYRGPDKKEDNNIQSVRHLFSELVAMEKPIILHNG
LVDLIFMYENLYTSLPSSSAMFLADLCDMFPNGIIDTKYITDFEHLMQASYLEYVFRKCQ
KDNESRAEKCTLHFPHYPASYPHVTYRNCNIKPKFDIDQNPDAYKMALCGSYSGHGWCPK
EKFCSKSHDIDLIIDVDNFMEKRKGRKRKRRRENKEAKETTDELSENENVSKGSNSAVLD
AGDVTVENGDSDDGLKSKLNTEEILQTLKRQVTEEETHANGGHRAGYDAFMTGFIYAVYR
ASGGKWIDKTEEWRNKLYLGGKDYPLSVSKSSFSKHSKQHLEKIGTIRKTEVQK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactttggtagagtaccagtaattgatgttcacagtgaaaatttacgggaggtg
tggccatcaatgatattagcattgtctaatgctacttttgttggacttgatacggagctg
agtggtttaggacatagaaagaaacttggggcaaagtctgttgaggacagatataagaat
atatgtgagactgctaaatctaggtctattctctcccttggtgtgtcatgtttccaacag
atgtcagcaccatctaataccaaccaatcagagagcaactgcttgtcaagtagccaatca
ggatccagatacatagttcaaactttcaatatcatgctgctgtgtgaggaagagttcatg
gttgagcctcaatctttgaggtttttggtacaacatggctttgatttcaataaacagtat
gagaaaggcgtaccttattatagaggtccagataagaaggaagataataacattcaatca
gttagacatttatttagtgaacttgttgctatggagaaaccaattattcttcataatggt
ctggtcgacctgatttttatgtatgagaatctgtacaccagtctaccgtccagctcagcg
atgtttctagcagatctatgcgacatgttcccaaatggcatcatcgacacaaagtatatc
accgactttgaacatctcatgcaagcatcttacctggaatatgtctttagaaaatgtcaa
aaagataatgaaagtagagctgaaaaatgcacattacatttcccacactatccggcaagt
taccctcatgtaacttacagaaactgtaacatcaaaccgaagtttgacattgatcaaaat
ccagatgcttacaaaatggctctctgtggctcatattcaggtcacggatggtgtccaaaa
gagaaattttgctccaagtcacatgacatagaccttatcattgatgttgacaatttcatg
gaaaaaagaaagggcagaaaacgaaagagaagacgtgaaaataaagaagcgaaagaaact
actgatgagttgtccgaaaacgaaaatgtttctaagggaagcaactctgctgtattagat
gctggggatgtcacagtggaaaatggagatagtgatgatggtttaaaaagtaaattaaat
actgaagaaattttacaaacacttaaaagacaggtaactgaagaagaaacgcatgccaat
ggtggacatagagccggctatgatgcattcatgacaggttttatttatgcagtgtacagg
gcctctggtggtaaatggatagataaaacagaggaatggaggaacaagttatatcttggt
ggaaaagactatcctctttcagttagtaaaagcagttttagcaaacattccaaacagcac
ttagagaaaataggtaccatcagaaaaactgaagttcaaaaataa
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