Ruditapes philippinarum (Manila clam): 132736006
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Entry
132736006 CDS
T09557
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132736006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rphi03032
]
132736006
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132736006
Enzymes [BR:
rphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132736006
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
132736006
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
132736006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
132736006
NCBI-ProteinID:
XP_060579033
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSYLPICTTAHLHVNPAHLHVNPAHQHVSTAHQHDFGESITLTKIHSSVKVYVSTPIVDG
INRIIRTFYEKCYKKDPWLWNLDWTMKEFKIKSKKKESKKKQKGEQGELESVEDIDCIQQ
VLKQEDRHYKNNTYMMGYPEWYRILCTRFTSDEWCPGPHKISHQTRVTPKLLRLTWDGYP
VHHDDTHGWGYLVPGRTDNLEDPVLEPGEETSIERQFPYEELCEILGIGKEASAVSIEDD
ECIDSDDEGNVDMTDKEFELKMDKMLNGLVNAGPKSYKHRKEGEDPKIKKAVKERRSRKR
LKHTGDGPYDSVNIPGCWFFKIPHKDGKGKRVGNPLAKDYVNRVEDGTLSAQSGPGADLV
LKLNKSSNYWKMNHKRIESQMAIWFSDEEIYDHIKQAPNYVEGSQIGAIVPRIVPAGTIT
RRGVEPTWLTASNAYVDRIGSELKSMVQAPPGFCFVGADVDSQELWIGAILGDANFGKTH
GCTALGWMTLQGSKKEGTDLHSVVAKTVDISRDHAKVFNYGRIYGAGQTFAQKLLQQFNH
RLTIEEARQKAKLMFATTKGKRCYRTGLWSGGSESSMFNKLEEIAKQEEPCTPVLGCRIS
KALEPENVSEDFMTSRINWVVQSSAVDYLHLMLSCMSWLFEEYNIKGRFSISIHDEVRYL
VAEEDCYRAALALQITNLLTRSIFAYKLGLKDLPLTVAFFSAVDIDQCLRKEVNLDCVTP
SNPHGLEKGYDIPQGTALDIHQILEKTGGSLNKDVQETEQNFTQFNDTEFIESSGDSSEE
NMENNETISGTVHA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatctgcccatctgcaccactgctcatctgcatgttaaccctgcccatctgcat
gttaaccctgcccatcagcatgttagtactgcccatcagcatgactttggagaatcaatt
accttgaccaaaatccattcaagtgtaaaagtctatgttagtacaccaattgttgatggt
attaatagaattatcaggacattttatgaaaaatgctataaaaaagacccctggttatgg
aacctagactggactatgaaagagttcaaaataaagagcaaaaagaaagagtcgaaaaag
aaacaaaaaggggagcaaggcgagttggaatcggttgaagatattgactgcatacagcaa
gtgttgaaacaggaagatcgacactataaaaataatacgtacatgatgggctatcctgaa
tggtatagaatactatgtacacgtttcactagtgatgagtggtgtccaggtccccacaag
atcagtcatcagacgagagtgaccccaaaacttctacgtctcacctgggacggctatccc
gtccaccatgatgacacacatggctggggatacctggtcccgggcagaacagataacttg
gaggacccagtactcgaacctggcgaagaaacatccatagaaaggcagttcccatatgag
gaactttgtgaaatcctgggtataggaaaagaagcctccgctgtaagtattgaagatgat
gaatgtattgatagtgatgatgagggaaatgttgatatgacagataaagagtttgaacta
aagatggacaagatgctgaatggacttgtaaatgccggtcccaaatcttacaaacatcgt
aaagaaggtgaagacccgaagataaaaaaagcagtcaaggaaagaagatcaagaaaacgt
ttaaaacatacaggagatggaccttatgacagtgtgaatattccaggctgctggttcttt
aaaattcctcacaaggatgggaagggtaagagagttggtaaccctctggcaaaagattat
gttaatcgtgttgaagatgggacactgtcggcacaatcaggtccaggtgcagatcttgtc
ctgaaattaaacaagtcatcaaactactggaaaatgaatcacaagcgtattgagtcacag
atggcaatatggttttctgatgaggagatatatgaccatatcaaacaggcaccaaattat
gtagaggggagtcaaataggagcaatagttcccagaattgtccctgctggtaccattaca
cggaggggtgtggaaccaacctggctgacagctagtaatgcatatgtggacagaattggg
agtgagttgaaatcaatggttcaggcaccaccaggattctgttttgtaggggctgatgtt
gactcacaggaattgtggattggtgctatcctaggggatgccaactttggaaagacacat
ggttgtacagctctgggttggatgacactacaaggcagtaagaaagagggcacagatcta
cacagtgtggttgccaaaacagttgatatctctagagaccatgccaaggtgtttaactat
gggcgtatatatggggcaggccagacgtttgcacagaaacttctccaacagtttaaccat
agacttacaattgaagaggcaaggcagaaagccaaactgatgtttgctactacaaaaggc
aaaagatgctaccgaacagggctgtggagtggtgggagtgaaagctctatgtttaacaag
ctggaagaaattgccaaacaagaggaaccctgcactccagtgctgggctgccggatcagc
aaggccttagaaccagaaaatgtcagcgaagattttatgacaagtcgtataaattgggtc
gtacagagttcagcagtggattatctccacttgatgctatcatgtatgagttggttgttt
gaagagtacaatatcaaaggacggttttctatcagtattcatgatgaagtcagatacctg
gtggctgaggaggattgttacagagcagctctagctctacagatcaccaatctactaacg
cgttcaatatttgcatacaaacttggtcttaaggatctgcctttaactgtggctttcttc
agtgctgttgatattgaccagtgtctacggaaggaagtaaacctagattgtgtcacacca
tcaaacccacatggacttgaaaagggctatgatataccacaaggtacagctctagatatt
caccagatattagagaaaacaggaggtagtctgaataaagatgtacaagagactgaacaa
aactttacacagtttaatgatactgaatttattgaaagcagcggagacagttccgaagag
aatatggaaaataatgaaactatttctgggacagtgcatgcatga
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