Ruditapes philippinarum (Manila clam): 132736070
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Entry
132736070 CDS
T09557
Name
(RefSeq) nucleoporin Nup37-like
KO
K14302
nuclear pore complex protein Nup37
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132736070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132736070
03036 Chromosome and associated proteins [BR:
rphi03036
]
132736070
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132736070
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132736070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
RodZ_C
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
132736070
NCBI-ProteinID:
XP_060579102
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MLLNFVIQKTSSHLLAAGTDSKVSVYLCKFKEEDDDVEDFDYERLAEFQNGCRATAIAWS
PETTITSLPKVLRFAVAGSDRRIRVFTTDLKGNDSVEILEGHTDFVNSVTFDPDTGDQLA
SVGDDRWCQIWDRDGNKQLKFPLGAPGMSVCWHREEPMKVMVGQKDGVIKIFSLSGQQQL
MSFDTGQVPLMEADWSVGNKGLLIGAVAGTDWFMFDVSVSSRPVERRQIHVEGARHFRWA
KCHDSLVATVGRPGRQIKVFNTKHQQNPLTISQPITYSISWHQKLPALAAGGDHKVHIYM
FDAL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgaattttgtaatacagaaaacaagttcccatcttctagccgcgggtacagat
tcgaaagtttcagtatacctttgtaaattcaaggaagaggacgatgatgttgaagatttt
gactatgaacgactcgctgaatttcagaatggttgccgggcaacagcaatagcatggagt
ccagaaacaaccatcacctccttgcctaaagttctcagatttgctgtagctggaagtgac
agaagaatacgagtattcaccacagatctgaaaggaaatgactctgtagaaatattagaa
ggacacacagactttgtgaactctgtgacctttgaccctgacactggggaccagcttgct
agtgtaggtgatgataggtggtgccagatctgggatagagatggtaacaaacaattgaag
ttcccccttggtgccccaggaatgtcagtttgttggcatagagaggaaccaatgaaggtt
atggtgggtcagaaagatggggttataaaaatattcagtctgagtggacaacaacagttg
atgtcttttgatacaggacaggtaccattgatggaagctgattggagtgtagggaataaa
gggctccttataggggctgtcgcggggacagactggtttatgtttgatgtttccgtgtcc
agtcgtccagtagaaagacgtcagatacatgtagaaggtgcaagacatttccgatgggca
aaatgtcacgattccctcgttgcgactgtagggagaccaggccgccagatcaaagtgttc
aatacaaaacatcaacagaatcccctgacaatatctcaaccgattacatacagtatcagc
tggcaccagaagttacctgcccttgctgccgggggtgatcacaaagttcatatttatatg
tttgatgcattgtaa
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