KEGG   Ruditapes philippinarum (Manila clam): 132736070
Entry
132736070         CDS       T09557                                 
Name
(RefSeq) nucleoporin Nup37-like
  KO
K14302  nuclear pore complex protein Nup37
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132736070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132736070
   03036 Chromosome and associated proteins [BR:rphi03036]
    132736070
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132736070
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    132736070
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C RodZ_C Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 132736070
NCBI-ProteinID: XP_060579102
LinkDB
Position
Unknown
AA seq 304 aa
MLLNFVIQKTSSHLLAAGTDSKVSVYLCKFKEEDDDVEDFDYERLAEFQNGCRATAIAWS
PETTITSLPKVLRFAVAGSDRRIRVFTTDLKGNDSVEILEGHTDFVNSVTFDPDTGDQLA
SVGDDRWCQIWDRDGNKQLKFPLGAPGMSVCWHREEPMKVMVGQKDGVIKIFSLSGQQQL
MSFDTGQVPLMEADWSVGNKGLLIGAVAGTDWFMFDVSVSSRPVERRQIHVEGARHFRWA
KCHDSLVATVGRPGRQIKVFNTKHQQNPLTISQPITYSISWHQKLPALAAGGDHKVHIYM
FDAL
NT seq 915 nt   +upstreamnt  +downstreamnt
atgttgttgaattttgtaatacagaaaacaagttcccatcttctagccgcgggtacagat
tcgaaagtttcagtatacctttgtaaattcaaggaagaggacgatgatgttgaagatttt
gactatgaacgactcgctgaatttcagaatggttgccgggcaacagcaatagcatggagt
ccagaaacaaccatcacctccttgcctaaagttctcagatttgctgtagctggaagtgac
agaagaatacgagtattcaccacagatctgaaaggaaatgactctgtagaaatattagaa
ggacacacagactttgtgaactctgtgacctttgaccctgacactggggaccagcttgct
agtgtaggtgatgataggtggtgccagatctgggatagagatggtaacaaacaattgaag
ttcccccttggtgccccaggaatgtcagtttgttggcatagagaggaaccaatgaaggtt
atggtgggtcagaaagatggggttataaaaatattcagtctgagtggacaacaacagttg
atgtcttttgatacaggacaggtaccattgatggaagctgattggagtgtagggaataaa
gggctccttataggggctgtcgcggggacagactggtttatgtttgatgtttccgtgtcc
agtcgtccagtagaaagacgtcagatacatgtagaaggtgcaagacatttccgatgggca
aaatgtcacgattccctcgttgcgactgtagggagaccaggccgccagatcaaagtgttc
aatacaaaacatcaacagaatcccctgacaatatctcaaccgattacatacagtatcagc
tggcaccagaagttacctgcccttgctgccgggggtgatcacaaagttcatatttatatg
tttgatgcattgtaa

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