Ruditapes philippinarum (Manila clam): 132736110
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Entry
132736110 CDS
T09557
Name
(RefSeq) serine--tRNA ligase, mitochondrial-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132736110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132736110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132736110
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
132736110
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132736110
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132736110
Prokaryotic type
132736110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RPW8
Motif
Other DBs
NCBI-GeneID:
132736110
NCBI-ProteinID:
XP_060579174
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MNTMWKHLMNPKSGILERPLTYTYLKSCRRFQHLTISRNFSQRYKGKCCQREAMMVKSRI
CLMSMEKCLLNRESHSWQNSNYLLKTKKHLTEQPMLPNDRFSQKRYYSSSIFVSDRHSDI
SSAFSYDLDLEEKLVDIEQLKVNLQRRGLDINIDQLKQDYAGYLQLGEEKVKLELKRENI
ASQIAKIVGEQKRSGTKTKDQTSQMKCLKEEGKNTKSHLKQLMVKYWDVEERVMLLALSL
PSNLSIDVPDDLKVLQEHFEERKPTLPVDHEEVLRQSDMVRLRNVGHKAYYLTGRLAVLE
QELVTYFSTQLRSQHIHQMAAPEMFKAPVVESGGIDMMDPASVYRLQHKLGTIDMSDRHT
DHMFLHGTSHLSFLSYFARMELACENLPIQMFAVGRNYIPENVERKSLPGLYGVLQSIKV
CMCAVCKSRESSAEVVEQFTNLLTKLYQQFKVPFRLVSLPAPSLTAAEEKRIELQMWIPS
LQQYLKIGSVSMCGDYNSRRLMIRSSQNTQNTSSKPVYMVHCEVTDITRMIAVLLEYQLT
DNTWDASR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaatactatgtggaaacatttgatgaacccgaaaagtggaattctagaaagacctttg
acctatacatatttgaaatcatgtagaagatttcagcatctgacaattagcagaaatttc
agtcagaggtacaagggaaaatgttgtcaaagagaggcaatgatggtaaagtctagaatt
tgtttaatgagcatggagaaatgtcttttaaacagagaaagtcattcttggcaaaattcc
aactacttgttaaagacgaagaaacacttaacagaacaaccaatgcttcctaatgatcgt
ttttcacagaagcggtattatagttcatctatatttgtgagtgacagacactccgatatc
tcatctgctttcagttatgaccttgaccttgaggagaaattggtggatattgagcagctg
aaagtaaacctacaaagaagagggctggacattaatattgatcagttgaaacaagactat
gcaggatatcttcaacttggagaggagaaagtgaagcttgagttgaaaagagaaaatatt
gccagccaaatagctaaaatagttggtgaacaaaaacggagtggaacaaagacaaaggat
cagacttcacaaatgaagtgtctcaaagaagaaggaaagaataccaaatctcacttaaaa
cagcttatggttaaatactgggatgtagaggagagagtcatgttacttgcattgtcctta
cccagcaatctttctatagatgttccagacgacttaaaagttctacaggaacattttgaa
gagagaaagcctacattaccagtagatcatgaggaagtgttgagacaatcagatatggtc
agattaaggaatgttggacacaaggcttactacctgactggcagactagctgtgttagaa
caagaactggtcacctacttctctacacaacttcgatctcaacacatacaccagatggca
gcaccagaaatgtttaaagctcccgttgtggaatctggcggcatagatatgatggacccg
gcttctgtatacagactgcagcataaactgggaaccattgatatgtcagaccggcacact
gatcacatgtttctacacggaacctcacacctctcttttctatcttattttgctagaatg
gagcttgcctgtgaaaatttacctatacaaatgtttgctgttggaaggaactacatacca
gaaaatgtagaaaggaaaagtttacctggtttatatggggtgttacagtcaatcaaggtg
tgtatgtgtgcagtgtgtaaatccagggagtctagtgcagaggtcgtggaacagttcaca
aatctgttaacgaagctatatcaacaatttaaagtacctttcagactggtttcactgcca
gcaccttctctgactgcagcagaagagaaaagaatagaattacagatgtggatacccagt
ttacaacagtatcttaaaataggatccgtgtcaatgtgtggagactacaacagcagaaga
cttatgattagatcatcacaaaatacacaaaacacatcctccaaacctgtttatatggta
cattgtgaggtcactgatataaccaggatgattgcagtactactagaataccaactcaca
gataacacttgggatgcaagtagatag
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