Ruditapes philippinarum (Manila clam): 132736173
Help
Entry
132736173 CDS
T09557
Name
(RefSeq) neurobeachin-like protein 1
KO
K23286
neurobeachin-like protein 1/2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132736173
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Others
Others
132736173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
PH_BEACH
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR55
Glyco_hydro_31_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_RSE1_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
132736173
NCBI-ProteinID:
XP_060579246
LinkDB
All DBs
Position
Unknown
AA seq
1515 aa
AA seq
DB search
SDNPQSYNAVLAVLQLIYTSGFDIKLEASRQILSILVSKNGGAKSFAKQLGWQEALSKLF
ILRPISMETSDLDVFDCDITMEKQADCDENRTKGGDSDETCSKGDDSEQNVEKSPLLRDY
DSPRGISAISPNNIVNGHNCDSEIDQKSDKENCDSSKELSVQKPSPPMHLNLSPGGDATR
KESVEFFSSSLNTPSTPLYLKSQLFGDLGASGPDDYIQPMSRSSSASAEDLSTIAQRAAE
RKSLEKDVSSSSISQLSQSESGIDLAEEVEMRRDSLSSSWHQNNTHRMLNSLGLRGSFLM
DVVENSEELCQNLLIILYTVMWKGVEGSDEAAWKIISLTVSPQNINSSCGKINGHSSQSY
MENAIELVRLVRYSLFKNEASMDGQMYSEMLLEDVMSLLDSLAVWDVPSGAGWQEMVHLG
LSVIVAFAQNNKLELCASATARLHMLVQTKLISSSAEAAYLIGHLNIVIVKAVDDETDNY
SFLIPVMKALIDKSYQLLNLDLNLPNLPSTMMSPTFFDDFKTYCKTEEWTTFIENYVEPQ
KQHFTENVFMDLTNKIADFWSNCQQEMMINMHKRNREHGESKLKFQSQVLDVYNKKVSNE
EKRFQNVTTQLRNQHAAALKQWRAAKRFFTGERGAWAGRDRPGLHWKLSNQENFSRMKVK
LIQNYNFDLHREASMLRDNLGVEDNVFMDEIKQLMVAKEALVSKENIGDDGIGDEDWNVM
NAQSTNVEEYQDKEKLVLSEECELVTLVEVIKGRLEVTTTHVYFFDCSNTRDEGGEDFKW
GLPQLREIHFRRYNLRRSAIEMFLIDQTNYFLNFQKKVRNKVYSRILGLRPPNLIYYGSR
SPAELLKASGLSQKWVQREISNFEYLMQLNTIAGRTYNDLSQYPVFPWILSDYTSDTLDL
DNASVFRDLSKPVGALNPRNEEEVREKFDHFEDPTGVIEKFHYGTHYSNSATVMHYMIRM
EPFTTLHISLQSGRFDVADRQFHSVPGTWKSMYNNPNDVKELIPEFFYLPEFLVNQNEFD
LGKLQISREVVDNVILPKWAETPEDFIYKHRKALESEYVSNNLHNWIDLIFGYKQKGPAA
VEALNVFYYCTYEGAVDLDAVKDVNERKALEGMINNFGQTPCQLLKDPHPKRLTFDEVVS
KAMKTDKHLSIFQFLEQIKVYFVEVSSETDPLVYIAVPRSQPRSIIQHGMLDTMVTISSE
GILGTHGWLPYDKSITNYFTFDKDPSVSNLKTRKKFNSPFAPGMEVDAKLFVVTHDSKLL
ISAGHWDNSLQVYHIGKGRRISHICRHIDIVTCLALDYCGSHLITGSRDTTCMIWQVQQQ
GGVCVNLLNKPLQTLYGHDDEVTAVHISSELDLAVSASKDGTVMVHTVRKGHYMRTLRPS
QTPGFNLDIPMLSVDDMGQIIIYCHETLPIDPKVVTSLHLYSINGKHICTQTVQSHLGHM
IVKGDYLITGDMDGNVIVYEIFGLKQLTSIPLIVPIHSVALTNGNSHLLAGLKDGKLIII
GIKSQPEVRSSLGGL
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
tcagataatcctcagagttacaacgcagtactagctgtattacagttgatatatactagt
ggatttgatattaaactagaagctagccgccaaattctgtcaatattagtgtcaaaaaac
ggtggtgcgaaaagtttcgccaaacagttaggatggcaggaagctctttctaaacttttt
attctccgccctatctccatggaaacaagtgaccttgacgtgtttgactgtgatataacc
atggagaaacaggcagactgtgatgaaaatagaacaaagggaggcgactctgatgaaacc
tgttcaaagggagacgattctgagcagaatgtagagaaaagtcctttgttaagagattat
gattctcctcgaggtataagtgcaatatcacctaacaacattgttaacggccataactgt
gatagtgaaattgatcaaaagagtgataaggaaaattgtgatagtagtaaggaattaagt
gttcaaaaaccgtcccctccaatgcatctaaatttaagcccaggaggtgatgcaactcgt
aaagaaagtgtcgaattcttctcatcttccctcaacacaccatctacccctctctatcta
aaatctcaacttttcggagatcttggagcctccggtcctgatgactatattcagccgatg
agtcggagttcaagcgctagcgcggaggatttaagcaccatcgctcaaagagccgcagaa
cgaaaatcgcttgaaaaagatgtaagttcatcgtcaatatcacaactctctcaaagtgaa
agtgggatagatttagcggaagaggtggaaatgaggcgggattccctgtcatcatcttgg
catcagaataacacgcacaggatgttgaatagtctaggactacgagggagttttctgatg
gatgtggtagagaattcggaagagttgtgtcagaatctgctgattatattgtatacagta
atgtggaagggtgtagaaggctccgatgaagctgcatggaagatcatttcgctcactgtt
tccccccagaatataaattctagttgtggaaaaatcaacggtcactcatcacagtcgtat
atggaaaatgctattgagctggtacggttggtcagatactccctctttaagaatgaagcc
agcatggatggacagatgtacagtgaaatgttactggaggatgtaatgagtttattggat
agtttagcagtgtgggatgtaccaagtggagcaggctggcaggaaatggttcatcttggt
ttaagtgtgatagtggcttttgctcaaaacaacaagttagagttatgtgccagtgctaca
gcgagacttcacatgttggtacagacgaaactgatttctagttctgctgaggcggcttac
ctcataggtcatctaaacattgtgatagtgaaggcagtagatgatgagacggacaactac
agtttcctgatacctgtaatgaaggcgttgattgataaatcctaccagcttctgaatctc
gatttaaatttgccaaacttaccttcgacaatgatgagcccaactttcttcgatgatttc
aaaacgtactgtaagacagaggagtggaccaccttcatcgaaaattatgttgagccacag
aagcagcattttacagagaacgtatttatggacttgacgaataaaatagccgatttctgg
tccaactgtcagcaagaaatgatgataaacatgcataaacgtaaccgtgaacacggcgag
agtaaacttaagtttcagagccaggtattagatgtgtacaacaagaaagtaagcaatgag
gagaaacggtttcagaatgtgacaacacagttacgtaatcagcacgcagctgccctgaaa
caatggagagcagcaaaacgattctttactggtgagaggggagcttgggctggaagggac
aggccaggtttacattggaagctatcaaaccaggagaatttctctcgtatgaaagttaaa
ctgatacagaattataactttgatttacacagagaggccagtatgctgagagataatctg
ggtgttgaagataatgttttcatggatgaaatcaagcaactcatggttgctaaggaagct
ctggtatccaaggagaacataggggatgatgggataggagatgaagattggaatgtgatg
aatgcacaaagtaccaatgttgaggaataccaagacaaagaaaagcttgtgttgtctgaa
gaatgtgaacttgtgaccttggttgaggtcatcaaaggtcgtctagaggtcacaacaacc
catgtctatttctttgactgcagtaacactagagatgaaggtggagaagatttcaagtgg
ggtttacctcagctgcgtgaaatacacttccgaaggtacaatctccggagatcagccatt
gagatgttcctcattgaccagaccaattatttcctcaactttcagaaaaaggtcagaaac
aaagtgtacagtcgtattttaggtctaaggccaccaaatttgatctattatgggtcacgg
tctcctgctgaacttttgaaggcatcaggccttagtcagaaatgggtccagcgtgagatt
agtaattttgagtacctgatgcagttgaacacaatagcaggaaggacttataatgacttg
agtcagtaccctgtgtttccatggatactgtcagattatacatcggatactcttgattta
gacaacgcatcagtatttcgagatttatcaaaaccagttggtgctctaaaccctcgtaat
gaggaggaagtgagagaaaagtttgatcattttgaggaccctactggtgtgatagagaag
ttccactacggcactcactattctaactctgcgacagtcatgcattacatgatccggatg
gaaccatttaccacattacatatttccctgcaaagtggaagatttgatgtggctgacaga
cagtttcattcagtaccaggcacatggaagtctatgtacaacaatccaaatgatgtcaaa
gaactcataccagaattcttctatctacctgaattcctggtgaatcaaaatgaatttgac
cttgggaagctgcagatttcaagggaagttgttgataatgttatattaccaaagtgggca
gagacaccagaagattttatatacaaacataggaaagcattggaatctgaatatgtgtcc
aataatcttcataattggatagatctgatatttggatataaacagaaaggtccagccgca
gtggaggccctcaatgtgttctactattgtacatatgaaggggctgtagatctagatgct
gtgaaagatgtcaatgaaagaaaagcattggagggaatgatcaacaactttgggcagacc
ccatgtcaattgttaaaggaccctcatcctaagaggttgacctttgatgaggtcgtttcc
aaggcaatgaagacagataagcatctcagcatttttcagttccttgaacagatcaaagtc
tactttgtcgaggtttcatcagagacagatcccctagtgtatatagctgtgcctagaagt
caacctagatctattatacaacatggaatgttagatacaatggtaacaatatcttcagag
ggaatcctgggaacacatggctggttgccgtatgataaatctatcacaaattatttcacc
ttcgataaagatccatctgtatcaaatctgaaaacaagaaagaagttcaacagtccgttt
gcaccgggtatggaagtagatgccaaattatttgtcgttacccatgattccaagctgctg
attagtgctggtcactgggacaacagcttacaggtgtatcatattggtaaaggacgtaga
atcagtcatatatgcaggcatatagatattgtaacatgtcttgcattagattactgtggc
agccatctcatcactggatcaagggacacaacttgcatgatctggcaagtacaacaacag
ggtggagtatgtgtaaatctcttgaacaaacctctacagaccttatatggccatgatgat
gaagtgacagcagttcatatctcatctgaacttgatttagctgtgtctgcaagtaaggat
ggtacagttatggtacacactgtaaggaagggtcattatatgagaactctcagaccgtcc
caaacacccggctttaatctagatataccaatgctctctgtagatgatatgggacaaatt
atcatatattgtcatgaaactttacccattgatccaaaggttgtgacctccttacattta
tattcaatcaacggaaaacacatctgtacacagacagtccaaagccatcttggtcacatg
atcgtcaagggagattacttgataacaggtgatatggatggaaatgttatcgtgtatgag
atttttggtttgaagcagctgacctcaatacctctaatagtgcctatacacagtgttgcc
ttgactaacggtaacagtcacctgttggccggactcaaggacggaaaacttataatcata
ggaataaagtctcagccggaagtcagatcatccttaggaggtttatag
DBGET
integrated database retrieval system
